RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DNM2P50570 870 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 AP3B2Q13367 1082 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 HSP90AA2PQ14568 343 aaPredicted RBP10.19□□□□□ -0.78
NUP54-211ENST00000512151 PRR16Q569H4 304 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 TTC8Q8TAM2 541 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 CPB2Q96IY4 423 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 CORO1BQ9BR76 489 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 UNC45AQ9H3U1 944 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 KLK14Q9P0G3 267 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 COL4A3BPQ9Y5P4 624 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 SF3B1O75533 1304 aaKnown RBP eCLIP10.19□□□□□ -0.782e-6■■■■■ 120.6
NUP54-211ENST00000512151 CNTNAP5Q8WYK1 1306 aa10.19□□□□□ -0.78
NUP54-211ENST00000512151 FREM2Q5SZK8 3169 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 NUP205Q92621 2012 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 BCLAF3A2AJT9 711 aaKnown RBP10.18□□□□□ -0.78
NUP54-211ENST00000512151 PATE3B3GLJ2 98 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 SH2B2O14492 632 aaPredicted RBP10.18□□□□□ -0.78
NUP54-211ENST00000512151 ZNF263O14978 683 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 TSPAN1O60635 241 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 CAVIN2O95810 425 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 SRGAP2CP0DJJ0 459 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 GSPT1P15170 499 aaKnown RBP10.18□□□□□ -0.78
NUP54-211ENST00000512151 FGD1P98174 961 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 CREB5Q02930 508 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 CCINQ13939 588 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 PON2Q15165 354 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 XKR3Q5GH77 459 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 DGKKQ5KSL6 1271 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 PLA2G4FQ68DD2 849 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 PPP1R18Q6NYC8 613 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 CNNM3Q8NE01 707 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 HNRNPLLQ8WVV9 542 aaKnown RBP10.18□□□□□ -0.78
NUP54-211ENST00000512151 SMARCD2Q92925 531 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 CXCL16Q9H2A7 254 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 GIT1Q9Y2X7 761 aa10.18□□□□□ -0.78
NUP54-211ENST00000512151 MYBPHLA2RUH7 354 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 FAM221BA6H8Z2 402 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 DDX11L8A8MPP1 907 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 HEPACAM2A8MVW5 462 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 SPECC1L-ADORA2AF8WAN1 911 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 MSH4O15457 936 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 C1QL1O75973 258 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CALM1P0DP23 149 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CALM2P0DP24 149 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CALM3P0DP25 149 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 GJA1P17302 382 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 PTPN2P17706 415 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CTHP32929 405 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 MLLT6P55198 1093 aaPredicted RBP10.17□□□□□ -0.78
NUP54-211ENST00000512151 SETQ01105 290 aaPredicted RBP10.17□□□□□ -0.78
NUP54-211ENST00000512151 FUT2Q10981 343 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 SCAPQ12770 1279 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 UAP1L1Q3KQV9 507 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 TTC22Q5TAA0 569 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 NFXL1Q6ZNB6 911 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 ANO5Q75V66 913 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 MFSD6LQ8IWD5 586 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CHCHD4Q8N4Q1 142 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 GLIS3Q8NEA6 775 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 DEPDC1BQ8WUY9 529 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 PRPF31Q8WWY3 499 aaKnown RBP10.17□□□□□ -0.78
NUP54-211ENST00000512151 TMEM143Q96AN5 459 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 TMEM9BQ9NQ34 198 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 SNTG2Q9NY99 539 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 MTRRQ9UBK8 725 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CDY1Q9Y6F8 540 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 TENM4Q6N022 2769 aa10.17□□□□□ -0.78
NUP54-211ENST00000512151 CCDC163A0A0D9SF12 145 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 ARHGEF37A1IGU5 675 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 PRC1O43663 620 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 AKAP3O75969 853 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 KPNA1P52294 538 aaPredicted RBP10.16□□□□□ -0.78
NUP54-211ENST00000512151 NPEPPSP55786 919 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 LAMTOR4Q0VGL1 99 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 GRIK3Q13003 919 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 CDR2LQ86X02 465 aaPredicted RBP10.16□□□□□ -0.78
NUP54-211ENST00000512151 LURAP1LQ8IV03 231 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 ZSCAN18Q8TBC5 510 aaPredicted RBP10.16□□□□□ -0.78
NUP54-211ENST00000512151 CSGALNACT1Q8TDX6 532 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 LRIG1Q96JA1 1093 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 LRRC3BQ96PB8 259 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 CSRNP2Q9H175 543 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 C8orf33Q9H7E9 229 aaPredicted RBP10.16□□□□□ -0.78
NUP54-211ENST00000512151 TRPV4Q9HBA0 871 aa10.16□□□□□ -0.78
NUP54-211ENST00000512151 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 EIF4E1BA6NMX2 242 aaKnown RBP10.15□□□□□ -0.78
NUP54-211ENST00000512151 HIP1O00291 1037 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 MICAL2O94851 1124 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 SEC24AO95486 1093 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 SEC24BO95487 1268 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 FGFR3P22607 806 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 CIITAP33076 1130 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 JAK3P52333 1124 aa10.15□□□□□ -0.78
NUP54-211ENST00000512151 FAM193AP78312 1265 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms