RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 DNAJC12Q9UKB3 198 aa17.27■□□□□ 0.36
SQSTM1-213ENST00000510187 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.36
SQSTM1-213ENST00000510187 MYADML2A6NDP7 307 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 HMGB1P1B2RPK0 211 aaPredicted RBP17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 MYL3P08590 195 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 GALCP54803 685 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 MYL7Q01449 175 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 MAPK7Q13164 816 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 DRAP1Q14919 205 aaPredicted RBP17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 ZC2HC1CQ53FD0 456 aaPredicted RBP17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 ODR4Q5SWX8 454 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 GJB7Q6PEY0 223 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 DAW1Q8N136 415 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 CEP89Q96ST8 783 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 XPNPEP3Q9NQH7 507 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 AMFRQ9UKV5 643 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 PPME1Q9Y570 386 aa17.27■□□□□ 0.35
SQSTM1-213ENST00000510187 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 TMCO5BA8MYB1 307 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 P4HA2O15460 535 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 RFC5P40937 340 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 MAGEA9P43362 315 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 MTMR3Q13615 1198 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 EMC2Q15006 297 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 GNASQ5JWF2 1037 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 MAATS1Q7Z4T9 603 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 DAAM2Q86T65 1068 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 SEC14L1Q92503 715 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 UPF3AQ9H1J1 476 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 DHX33Q9H6R0 707 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 XPNPEP1Q9NQW7 623 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 PDLIM7Q9NR12 457 aa17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 DDX20Q9UHI6 824 aaKnown RBP17.26■□□□□ 0.35
SQSTM1-213ENST00000510187 MYH11P35749 1972 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 ZBTB42B2RXF5 422 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 KRIT1O00522 736 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 SART1O43290 800 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 F2P00734 622 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 ECHS1P30084 290 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 HADHBP55084 474 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 SOX10P56693 466 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 BFSP1Q12934 665 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 CTNNBL1Q8WYA6 563 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 ATP6V1G3Q96LB4 118 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 NAP1L3Q99457 506 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 GPR88Q9GZN0 384 aa17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 HMX1Q9NP08 348 aaPredicted RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 LARSQ9P2J5 1176 aaKnown RBP17.25■□□□□ 0.35
SQSTM1-213ENST00000510187 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 INSRRP14616 1297 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 CYP2J2P51589 502 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 IGBP1P78318 339 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 HLTFQ14527 1009 aaKnown RBP eCLIP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 TCEAL1Q15170 157 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 CBWD6Q4V339 395 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 CBWD3Q5JTY5 395 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 ZNF484Q5JVG2 852 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 CBWD5Q5RIA9 395 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 KAT2BQ92831 832 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 ARID2Q68CP9 1835 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 ATXN2Q99700 1313 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 GOLGA6L10A6NI86 522 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 EBAG9O00559 213 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 MAPK13O15264 365 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 KPNA6O60684 536 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 ADAMTS4O75173 837 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 MAFO75444 373 aaPredicted RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 KRT14P02533 472 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 HSPA8P11142 646 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 KRT13P13646 458 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 PLS3P13797 630 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 SNRPFP62306 86 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 NKX3-2P78367 333 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 MFSD10Q14728 455 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 SPDYCQ5MJ68 293 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 INTS8Q75QN2 995 aaKnown RBP17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 EFCAB13Q8IY85 973 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 EXOC8Q8IYI6 725 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 C10orf67Q8IYJ2 551 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 BCAS4Q8TDM0 211 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 CARD9Q9H257 536 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 GOLPH3Q9H4A6 298 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 FAM114A2Q9NRY5 505 aa17.24■□□□□ 0.35
SQSTM1-213ENST00000510187 ANKRD62A6NC57 917 aa17.23■□□□□ 0.35
SQSTM1-213ENST00000510187 EXOC3O60645 756 aa17.23■□□□□ 0.35
SQSTM1-213ENST00000510187 MSCO60682 206 aa17.23■□□□□ 0.35
SQSTM1-213ENST00000510187 NR1D1P20393 614 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms