RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 FAM213AQ9BRX8 229 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 FGFBP2Q9BYJ0 223 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 NUP62CLQ9H1M0 184 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 ENTPD7Q9NQZ7 604 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 RBAKQ9NYW8 714 aaPredicted RBP9.93□□□□□ -0.82
NUP54-207ENST00000508583 HSPBP1Q9NZL4 362 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 UBQLN1Q9UMX0 589 aaKnown RBP9.93□□□□□ -0.82
NUP54-207ENST00000508583 FRMD4BQ9Y2L6 1034 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 R3HCC1Q9Y3T6 440 aaKnown RBP9.93□□□□□ -0.82
NUP54-207ENST00000508583 PCDHA5Q9Y5H7 936 aa9.93□□□□□ -0.82
NUP54-207ENST00000508583 EYSQ5T1H1 3165 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 TMEM189-UBE2V1I3L0A0 370 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 RFXAPO00287 272 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 PTGESO14684 152 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 NRP1O14786 923 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 TGFB1I1O43294 461 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 FAM189A1O60320 539 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 EXOC3O60645 756 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 TADA2AO75478 443 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 DDHD2O94830 711 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 ADRB2P07550 413 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SLC11A1P49279 550 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 ACOT2P49753 483 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 CREMQ03060 361 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SMC1AQ14683 1233 aaKnown RBP9.92□□□□□ -0.82
NUP54-207ENST00000508583 NFIL3Q16649 462 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 EDRF1Q3B7T1 1238 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SLC10A6Q3KNW5 377 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 GLRA4Q5JXX5 417 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 DCLRE1AQ6PJP8 1040 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SLC9A9Q8IVB4 645 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 BRSK2Q8IWQ3 736 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 GPR65Q8IYL9 337 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SPPL3Q8TCT6 385 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 POF1BQ8WVV4 589 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 SYAP1Q96A49 352 aaPredicted RBP9.92□□□□□ -0.82
NUP54-207ENST00000508583 FNBP1Q96RU3 617 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 CDCA3Q99618 268 aaPredicted RBP9.92□□□□□ -0.82
NUP54-207ENST00000508583 CBWD1Q9BRT8 395 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 HAPLN2Q9GZV7 340 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 CLSTN2Q9H4D0 955 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 NSUN3Q9H649 340 aaKnown RBP9.92□□□□□ -0.82
NUP54-207ENST00000508583 LMBRD1Q9NUN5 540 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 HCSTQ9UBK5 93 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 DNAJB4Q9UDY4 337 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 ADAM28Q9UKQ2 775 aa9.92□□□□□ -0.82
NUP54-207ENST00000508583 PRG3Q9Y2Y8 225 aaPredicted RBP9.92□□□□□ -0.82
NUP54-207ENST00000508583 REV3LO60673 3130 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 BICDL2A1A5D9 508 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 CASTOR2A6NHX0 329 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 LACTBL1A8MY62 500 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TISP43B9A030 160 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 GRM6O15303 877 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 B3GAT3O94766 335 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 URODP06132 367 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 HOXD13P35453 343 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TNFSF9P41273 254 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 CYP2J2P51589 502 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 LRRC63Q05C16 580 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 SNRNP35Q16560 246 aaKnown RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 UPP1Q16831 310 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 SEZ6Q53EL9 994 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 KIAA1841Q6NSI8 718 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 ELMSAN1Q6PJG2 1045 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 GLIS3Q8NEA6 775 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 SAAL1Q96ER3 474 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 DHTKD1Q96HY7 919 aaPredicted RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 FBXL18Q96ME1 805 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TCF25Q9BQ70 676 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 KCTD10Q9H3F6 313 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 PCIF1Q9H4Z3 704 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 ALG13Q9NP73 1137 aaKnown RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.91□□□□□ -0.82
NUP54-207ENST00000508583 MRPL17Q9NRX2 175 aaKnown RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 MIOSQ9NXC5 875 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 DACH1Q9UI36 760 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TRAF3IP3Q9Y228 551 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 NUB1Q9Y5A7 615 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 MTCH2Q9Y6C9 303 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 TRIP11Q15643 1979 aa9.91□□□□□ -0.82
NUP54-207ENST00000508583 PDCD11Q14690 1871 aaKnown RBP9.91□□□□□ -0.82
NUP54-207ENST00000508583 ATG2AQ2TAZ0 1938 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 PLXNA4Q9HCM2 1894 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 NT5C1B-RDH14C9J2C7 533 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
NUP54-207ENST00000508583 PODXLO00592 558 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 CLIC2O15247 247 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 MAPK13O15264 365 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 FGFR1OPO95684 399 aaKnown RBP9.9□□□□□ -0.82
NUP54-207ENST00000508583 TNNC2P02585 160 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 NR3C1P04150 777 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 SOD2P04179 222 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 TMEM191BP0C7N4 346 aa9.9□□□□□ -0.82
NUP54-207ENST00000508583 CTSAP10619 480 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms