RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 POLHQ9Y253 713 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 USP15Q9Y4E8 981 aaPredicted RBP6.63□□□□□ -1.35
GYPA-205ENST00000508337 IPPQ9Y573 584 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 TCRBV7S2A1N4TA0A589 114 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 MATN3O15232 486 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 ZNF202O95125 648 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 ZRANB2O95218 330 aaKnown RBP eCLIP6.62□□□□□ -1.35
GYPA-205ENST00000508337 ARIH2O95376 493 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 FTLP02792 175 aaPredicted RBP6.62□□□□□ -1.35
GYPA-205ENST00000508337 AMY1AP04745 511 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 GNAI3P08754 354 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 U2AF1L5P0DN76 240 aaPredicted RBP6.62□□□□□ -1.35
GYPA-205ENST00000508337 HSPA6P17066 643 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 AKAP5P24588 427 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 GNAI1P63096 354 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 U2AF1Q01081 240 aaKnown RBP eCLIP6.62□□□□□ -1.35
GYPA-205ENST00000508337 TARDBPQ13148 414 aaKnown RBP eCLIP6.62□□□□□ -1.35
GYPA-205ENST00000508337 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 FOXR2Q6PJQ5 311 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 USP45Q70EL2 814 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 HTR3DQ70Z44 454 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 GPRIN1Q7Z2K8 1008 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 CAMKK1Q8N5S9 505 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 FITM2Q8N6M3 262 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 ZNF483Q8TF39 744 aaPredicted RBP6.62□□□□□ -1.35
GYPA-205ENST00000508337 JPH3Q8WXH2 748 aaPredicted RBP6.62□□□□□ -1.35
GYPA-205ENST00000508337 NRDE2Q9H7Z3 1164 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 NMRK2Q9NPI5 230 aa6.62□□□□□ -1.35
GYPA-205ENST00000508337 AKAP10O43572 662 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 ERN1O75460 977 aaKnown RBP6.61□□□□□ -1.35
GYPA-205ENST00000508337 HAUS5O94927 633 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 ADH4P08319 380 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 C6P13671 934 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 PDCP20941 246 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 TACR2P21452 398 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 CYP2C19P33261 490 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 TOB2Q14106 344 aaPredicted RBP6.61□□□□□ -1.35
GYPA-205ENST00000508337 PGS1Q32NB8 556 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 SPDYE7PQ495Y7 208 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 PABPC1LQ4VXU2 614 aaKnown RBP6.61□□□□□ -1.35
GYPA-205ENST00000508337 TIGD2Q4W5G0 525 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 GRAMD1CQ8IYS0 662 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 C3orf20Q8ND61 904 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 SLC46A2Q9BY10 475 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 RNF181Q9P0P0 153 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 CALCOCO1Q9P1Z2 691 aa6.61□□□□□ -1.35
GYPA-205ENST00000508337 PNMA8BQ9ULN7 279 aaPredicted RBP6.61□□□□□ -1.35
GYPA-205ENST00000508337 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 CDHR4A6H8M9 788 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 LEFTY2O00292 366 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
GYPA-205ENST00000508337 GRM6O15303 877 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 ABLIM3O94929 683 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 LAG3P18627 525 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 MCM7P33993 719 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 DGCR2P98153 550 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 ABHD18Q0P651 414 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 UBXN2BQ14CS0 331 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 MIIPQ5JXC2 388 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 TSHZ3Q63HK5 1081 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 KCNV1Q6PIU1 500 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 TBC1D15Q8TC07 691 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 MTFMTQ96DP5 389 aaKnown RBP6.6□□□□□ -1.35
GYPA-205ENST00000508337 MYOCQ99972 504 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 RNPEPQ9H4A4 650 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 SLAMF7Q9NQ25 335 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 CEP72Q9P209 647 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 MTO1Q9Y2Z2 717 aaKnown RBP6.6□□□□□ -1.35
GYPA-205ENST00000508337 NOX1Q9Y5S8 564 aa6.6□□□□□ -1.35
GYPA-205ENST00000508337 DRGXA6NNA5 263 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 NPIPB8E9PQR5 432 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 SLC16A6O15403 523 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 MAKP20794 623 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 EDNRBP24530 442 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 GDF5P43026 501 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 PPP4R4Q6NUP7 873 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 CHPFQ8IZ52 775 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 OR56A1Q8NGH5 318 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 IFI44Q8TCB0 444 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 CACTINQ8WUQ7 758 aaKnown RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 CLIP3Q96DZ5 547 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 MVB12AQ96EY5 273 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 VRK1Q99986 396 aaPredicted RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 GTPBP4Q9BZE4 634 aaKnown RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 GSTO2Q9H4Y5 243 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 ZNF703Q9H7S9 590 aaPredicted RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 TCF7L1Q9HCS4 588 aa6.59□□□□□ -1.35
GYPA-205ENST00000508337 NOB1Q9ULX3 412 aaKnown RBP6.59□□□□□ -1.35
GYPA-205ENST00000508337 FZD7O75084 574 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 PEX11BO96011 259 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 TNFRSF1AP19438 455 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 ZNF280AP59817 542 aaPredicted RBP6.58□□□□□ -1.36
GYPA-205ENST00000508337 ATP8B2P98198 1209 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 TLE1Q04724 770 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 DACT2Q5SW24 774 aa6.58□□□□□ -1.36
GYPA-205ENST00000508337 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms