RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 CPSF2Q9P2I0 782 aaKnown RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 FBXO40Q9UH90 709 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 HMGB1P1B2RPK0 211 aaPredicted RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 ATF7P17544 494 aaPredicted RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 CTNNA2P26232 953 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 STAT5BP51692 787 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 MAGOHP61326 146 aaKnown RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 XRRA1Q6P2D8 792 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 ZNF365Q70YC5 407 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 LRRC71Q8N4P6 559 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 RDM1Q8NG50 284 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 WNT8AQ9H1J5 351 aa10.4□□□□□ -0.74
CSF1R-203ENST00000504875 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
CSF1R-203ENST00000504875 NCANO14594 1321 aa10.4□□□□□ -0.75
CSF1R-203ENST00000504875 PASKQ96RG2 1323 aa10.4□□□□□ -0.75
CSF1R-203ENST00000504875 ZNF541Q9H0D2 1346 aa10.4□□□□□ -0.75
CSF1R-203ENST00000504875 A0A1B0GUA9 196 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 CES2O00748 559 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ECEL1O95672 775 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 OATP04181 439 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 PYGMP11217 842 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 GNA15P30679 374 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 BPIFB4P59827 614 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 FMO1Q01740 532 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 CLUL1Q15846 466 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 LLGL2Q6P1M3 1020 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 CPLX4Q7Z7G2 160 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 HOOK3Q86VS8 718 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 MPHOSPH6Q99547 160 aaKnown RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ERP44Q9BS26 406 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 KLHL11Q9NVR0 708 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 GREB1LQ9C091 1923 aaPredicted RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 RGS16O15492 202 aaPredicted RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 KCNA2P16389 499 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 FGFR4P22455 802 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ADCY8P40145 1251 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 SEC24CP53992 1094 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ZBTB8OSQ8IWT0 167 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 FAM71AQ8IYT1 594 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 LMO3Q8TAP4 145 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 FBXO25Q8TCJ0 367 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ZNF214Q9UL59 606 aaPredicted RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ADGRA3Q8IWK6 1321 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 EIF3HO15372 352 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 DDX3YO15523 660 aaKnown RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 EXTL3O43909 919 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 PGK2P07205 417 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 TMEM191BP0C7N4 346 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 HSPA6P17066 643 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 RRM1P23921 792 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 TNFRSF8P28908 595 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 CHRNA3P32297 505 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 SNRPFP62306 86 aaKnown RBP10.39□□□□□ -0.75
CSF1R-203ENST00000504875 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 SLFN11Q7Z7L1 901 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 TRIM50Q86XT4 487 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 HVCN1Q96D96 273 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 PLCD4Q9BRC7 762 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 GTF3C4Q9UKN8 822 aa10.39□□□□□ -0.75
CSF1R-203ENST00000504875 PHF2O75151 1096 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ACSL3O95573 720 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 EZRP15311 586 aaKnown RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 HSPA9P38646 679 aaKnown RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 PMS2P54278 862 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 PTENP60484 403 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 SLFN12LQ6IEE8 588 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ACAD10Q6JQN1 1059 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 CATSPERGQ6ZRH7 1159 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 RHPN2Q8IUC4 686 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 IQCKQ8N0W5 287 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 MGARPQ8TDB4 240 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ASAP3Q8TDY4 903 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ATG4AQ8WYN0 398 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 SHC3Q92529 594 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 MRRFQ96E11 262 aaKnown RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 CYFIP2Q96F07 1278 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 MTFR1LQ9H019 292 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 C17orf75Q9HAS0 396 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GOLGA8SH3BPF8 625 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 IRF6O14896 467 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GAS8O95995 478 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 GZMAP12544 262 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 PPATQ06203 517 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 C1orf220Q5T0J3 134 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 DCAF12L1Q5VU92 463 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 C12orf56Q8IXR9 622 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 TAB3Q8N5C8 712 aaPredicted RBP10.38□□□□□ -0.75
CSF1R-203ENST00000504875 TMC2Q8TDI7 906 aa10.38□□□□□ -0.75
CSF1R-203ENST00000504875 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms