RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FXR2P51116 673 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 F5H423 210 aaPredicted RBP17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 MMTAG2Q9BU76 263 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 POLR3CQ9BUI4 534 aaPredicted RBP17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 SIK2Q9H0K1 926 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 IRAK4Q9NWZ3 460 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 ZFATQ9P243 1243 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 RALAP11233 206 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 MAPRE2Q15555 327 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 RIT2Q99578 217 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 TRABDQ9H4I3 376 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 RNF181Q9P0P0 153 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 ZNF212Q9UDV6 495 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 PPP1R37O75864 691 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 NCOA4Q13772 614 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 PIGHQ14442 188 aaPredicted RBP17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 RGS9BPQ6ZS82 235 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 RNF217Q8TC41 542 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 SEPT1Q8WYJ6 367 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
PCDHA1-203ENST00000504120 MYBP10242 640 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 RFC5P40937 340 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 ZBTB41Q5SVQ8 909 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SMARCAD1Q9H4L7 1026 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 PPCSQ9HAB8 311 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 PSMD14O00487 310 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 NTSR2O95665 410 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 P4HA2O15460 535 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 CHGBP05060 677 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 NR3C2P08235 984 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 MDH1P40925 334 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 ACOT2P49753 483 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM143Q96AN5 459 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SARS2Q9NP81 518 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 MROH2AA6NES4 1674 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 CAPRIN1Q14444 709 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 RBBP8NLQ8NC74 664 aaPredicted RBP17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SLC30A5Q8TAD4 765 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SH3TC2Q8TF17 1288 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 FOXP3Q9BZS1 431 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 PLEKHA5Q9HAU0 1116 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 FHOD1Q9Y613 1164 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
PCDHA1-203ENST00000504120 CFAP69A5D8W1 941 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 KCNN4O15554 427 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 HNRNPCL1O60812 293 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 CDH16O75309 829 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 RPA1P27694 616 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 HOXD10P28358 340 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 HADHAP40939 763 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 TPI1P60174 286 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 GUCY1A3Q02108 690 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 SPATA21Q7Z572 469 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 CPA5Q8WXQ8 436 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ADA2Q9NZK5 511 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ESRRBO95718 433 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 DCCP43146 1447 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ZBTB17Q13105 803 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ZNF235Q14590 738 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 TRAPPC11Q7Z392 1133 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ASAP3Q8TDY4 903 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ASIC4Q96FT7 647 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ING2Q9H160 280 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 SPATA31A6Q5VVP1 1343 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 MAFGO15525 162 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 MYCP01106 439 aaPredicted RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 TMEM253P0C7T8 217 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 PDGFRAP16234 1089 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 P3H1Q32P28 736 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 RAD9BQ6WBX8 426 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 USP49Q70CQ1 688 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ZNF280CQ8ND82 737 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 EML4Q9HC35 981 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 PSMD3O43242 534 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 CTDNEP1O95476 244 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 EMC2Q15006 297 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ANO5Q75V66 913 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 OR6J1Q8NGC5 347 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 CEP19Q96LK0 163 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 EGFL8Q99944 293 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 PIN4Q9Y237 131 aaKnown RBP17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 ARL2BPQ9Y2Y0 163 aa17.42■□□□□ 0.38
PCDHA1-203ENST00000504120 CPB1P15086 417 aa17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 AARSP49588 968 aaKnown RBP eCLIP17.41■□□□□ 0.38
PCDHA1-203ENST00000504120 SULT1E1P49888 294 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms