RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 P2RX5Q93086 422 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 TMEM175Q9BSA9 504 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 PLEKHA5Q9HAU0 1116 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 RBAKQ9NYW8 714 aaPredicted RBP17.93■□□□□ 0.46
SCLT1-205ENST00000503401 SPG21Q9NZD8 308 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 TUBGCP4Q9UGJ1 667 aa17.93■□□□□ 0.46
SCLT1-205ENST00000503401 PDXKO00764 312 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 KIF20AO95235 890 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 LDHAP00338 332 aaKnown RBP17.92■□□□□ 0.46
SCLT1-205ENST00000503401 NFICP08651 508 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 IGFBP6P24592 240 aaPredicted RBP17.92■□□□□ 0.46
SCLT1-205ENST00000503401 GUCY2FP51841 1108 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 SNRPFP62306 86 aaKnown RBP17.92■□□□□ 0.46
SCLT1-205ENST00000503401 GOLGA5Q8TBA6 731 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 IGSF21Q96ID5 467 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 FAM84AQ96KN4 292 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 MARCH5Q9NX47 278 aa17.92■□□□□ 0.46
SCLT1-205ENST00000503401 NR3C1P04150 777 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 ADRB2P07550 413 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 PPM1AP35813 382 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 CLCNKBP51801 687 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 SNRNP35Q16560 246 aaKnown RBP17.91■□□□□ 0.46
SCLT1-205ENST00000503401 BRSK2Q8IWQ3 736 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 C12orf56Q8IXR9 622 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 ADSSL1Q8N142 457 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 XXYLT1Q8NBI6 393 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 POF1BQ8WVV4 589 aa17.91■□□□□ 0.46
SCLT1-205ENST00000503401 GAS2L1Q99501 681 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-205ENST00000503401 CGNQ9P2M7 1197 aaKnown RBP17.91■□□□□ 0.46
SCLT1-205ENST00000503401 KIAA0391O15091 583 aaKnown RBP17.9■□□□□ 0.46
SCLT1-205ENST00000503401 CALUO43852 315 aaPredicted RBP17.9■□□□□ 0.46
SCLT1-205ENST00000503401 EXOC3O60645 756 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 MBD3O95983 291 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 PMS1P54277 932 aaKnown RBP17.9■□□□□ 0.46
SCLT1-205ENST00000503401 CAMK1Q14012 370 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 KLHL10Q6JEL2 608 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 EFCAB13Q8IY85 973 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 EEF2KMTQ96G04 330 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 TMEM169Q96HH4 297 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 FBXL18Q96ME1 805 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 VN1R3Q9BXE9 311 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 PDE11AQ9HCR9 933 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 SLC38A7Q9NVC3 462 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 TRAF3IP3Q9Y228 551 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 PCDHGC5Q9Y5F6 944 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 TRIM49BA6NDI0 452 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 KIF4AO95239 1232 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 FOSL2P15408 326 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 CASP4P49662 377 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 PLCB3Q01970 1234 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 HSP90AA2PQ14568 343 aaPredicted RBP17.9■□□□□ 0.46
SCLT1-205ENST00000503401 TMEM132DQ14C87 1099 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 ZBTB6Q15916 424 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 ZCWPW2Q504Y3 356 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 COBLL1Q53SF7 1204 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 MICALL1Q8N3F8 863 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 ASB7Q9H672 318 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 DMAC2Q9NW81 257 aa17.9■□□□□ 0.46
SCLT1-205ENST00000503401 PPP1R3GB7ZBB8 358 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 IL18RAPO95256 599 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 NR2F2P24468 414 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 IRS1P35568 1242 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 KRT17Q04695 432 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 UPP1Q16831 310 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 CEP135Q66GS9 1140 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.45
SCLT1-205ENST00000503401 CD302Q8IX05 232 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 C3orf58Q8NDZ4 430 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 COLEC11Q9BWP8 271 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 MTCH2Q9Y6C9 303 aa17.89■□□□□ 0.45
SCLT1-205ENST00000503401 SCN1AP35498 2009 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 PODXLO00592 558 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 ERVFC1P60507 584 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 STIM1Q13586 685 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 ANKRD40Q6AI12 368 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 CENPPQ6IPU0 288 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 SLC9A9Q8IVB4 645 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 TRIML1Q8N9V2 468 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 CCDC127Q96BQ5 260 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 GTPBP4Q9BZE4 634 aaKnown RBP17.88■□□□□ 0.45
SCLT1-205ENST00000503401 KIAA1586Q9HCI6 787 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 ADAM28Q9UKQ2 775 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 UBQLN1Q9UMX0 589 aaKnown RBP17.88■□□□□ 0.45
SCLT1-205ENST00000503401 CTNND2Q9UQB3 1225 aa17.88■□□□□ 0.45
SCLT1-205ENST00000503401 PSMA7O14818 248 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 TADA2AO75478 443 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 B3GAT3O94766 335 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 TFAMQ00059 246 aaKnown RBP17.87■□□□□ 0.45
SCLT1-205ENST00000503401 POU5F1Q01860 360 aaKnown RBP17.87■□□□□ 0.45
SCLT1-205ENST00000503401 CYP24A1Q07973 514 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 TAS1R1Q7RTX1 841 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 VPS52Q8N1B4 723 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 MRPL38Q96DV4 380 aaKnown RBP17.87■□□□□ 0.45
SCLT1-205ENST00000503401 B3GALT6Q96L58 329 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 POP1Q99575 1024 aaKnown RBP17.87■□□□□ 0.45
SCLT1-205ENST00000503401 GPR62Q9BZJ7 368 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 TLR9Q9NR96 1032 aa17.87■□□□□ 0.45
SCLT1-205ENST00000503401 TMEM63CQ9P1W3 806 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms