RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 NHEJ1Q9H9Q4 299 aaPredicted RBP9.79□□□□□ -0.84
NR1I3-216ENST00000502848 NLRC4Q9NPP4 1024 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 DNAJC12Q9UKB3 198 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 PPP2R2CQ9Y2T4 447 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 GRIN2DO15399 1336 aa9.79□□□□□ -0.84
NR1I3-216ENST00000502848 KAT6AQ92794 2004 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 SOWAHDA6NJG2 315 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ARVCFO00192 962 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 XPOTO43592 962 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PARNO95453 639 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ACTN1P12814 892 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PAX3P23760 479 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 BPIFB4P59827 614 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 NCOA4Q13772 614 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 SPA17Q15506 151 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 SLC18A3Q16572 532 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PPP1R2P3Q6NXS1 205 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 IRF2BP2Q7Z5L9 587 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ZNF677Q86XU0 584 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 FAM71AQ8IYT1 594 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 HELQQ8TDG4 1101 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 UBE2Q2Q8WVN8 375 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 PPP1R13BQ96KQ4 1090 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
NR1I3-216ENST00000502848 SNX27Q96L92 541 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ACAP3Q96P50 834 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 DEF6Q9H4E7 631 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 CNTN3Q9P232 1028 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 CNTN6Q9UQ52 1028 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 RALGAPA2Q2PPJ7 1873 aa9.78□□□□□ -0.84
NR1I3-216ENST00000502848 BTNL10A8MVZ5 291 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 KRT86O43790 486 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 EVI5O60447 810 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 RPS6KA5O75582 802 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 VNN1O95497 513 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 P4HA1P13674 534 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 KCNE1P15382 129 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CYP3A5P20815 502 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 TNFSF9P41273 254 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CDK7P50613 346 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 KIF11P52732 1056 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CHMP4BP1P59074 171 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF200P98182 395 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 GOLGA8FQ08AF8 430 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 GOLGA8DPQ0D2H9 430 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 BIRC3Q13489 604 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 TDRD12Q587J7 1177 aaKnown RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 FAM47CQ5HY64 1035 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 ZBTB41Q5SVQ8 909 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 FBXO46Q6PJ61 603 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CTU1Q7Z7A3 348 aaKnown RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 FAM228AQ86W67 206 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 REXO1L1PQ8IX06 675 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 THNSL1Q8IYQ7 743 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 DNAJC5GQ8N7S2 189 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 TMEM40Q8WWA1 233 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 ARMC5Q96C12 935 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CHP1Q99653 195 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 GPR88Q9GZN0 384 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 NIF3L1Q9GZT8 377 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
NR1I3-216ENST00000502848 UBE2TQ9NPD8 197 aaPredicted RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
NR1I3-216ENST00000502848 PJA2O43164 708 aa9.76□□□□□ -0.85
NR1I3-216ENST00000502848 AKR1B10O60218 316 aa9.76□□□□□ -0.85
NR1I3-216ENST00000502848 ZNF623O75123 536 aa9.76□□□□□ -0.85
NR1I3-216ENST00000502848 PHACTR2O75167 634 aa9.76□□□□□ -0.85
NR1I3-216ENST00000502848 CXCL8P10145 99 aa9.76□□□□□ -0.85
NR1I3-216ENST00000502848 HARSP12081 509 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms