RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 KCNJ14Q9UNX9 436 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
CDK9-205ENST00000498339 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 A0A1B0GUA9 196 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 CHURC1-FNTBB4DL54 471 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 PTGESO14684 152 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 N4BP3O15049 544 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 GDF9O60383 454 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 B3GAT3O94766 335 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 BAG4O95429 457 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 TDGF1P13385 188 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 PTPN2P17706 415 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 GLRA2P23416 452 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 PDIA3P30101 505 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 GDI1P31150 447 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 CXCL12P48061 93 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 FNTBP49356 437 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 ARPP19P56211 112 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 POU5F1BQ06416 359 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 SRSF5Q13243 272 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 FZD5Q13467 585 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 CSRP2Q16527 193 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 PDZD4Q76G19 769 aaPredicted RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 CEP68Q76N32 757 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 SLFN12Q8IYM2 578 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 NAP1L4Q99733 375 aaKnown RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 NFKBIZQ9BYH8 718 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 GDAQ9Y2T3 454 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 SPAG17Q6Q759 2223 aa12.89□□□□□ -0.35
CDK9-205ENST00000498339 KIF26AQ9ULI4 1882 aaPredicted RBP12.89□□□□□ -0.35
CDK9-205ENST00000498339 F5P12259 2224 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 TBX3O15119 743 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 CDC45O75419 566 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 FCARP24071 287 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 TKTP29401 623 aaKnown RBP12.88□□□□□ -0.35
CDK9-205ENST00000498339 ARL2P36404 184 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 STK3Q13188 491 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 FAM78AQ5JUQ0 283 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 GLRA4Q5JXX5 417 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 RTL10Q7L3V2 364 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 HAS1Q92839 578 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
CDK9-205ENST00000498339 PRIMPOLQ96LW4 560 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 EIF2AK1Q9BQI3 630 aaKnown RBP12.88□□□□□ -0.35
CDK9-205ENST00000498339 CITO14578 2027 aa12.88□□□□□ -0.35
CDK9-205ENST00000498339 SHISA7A6NL88 538 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 I3L4J1 428 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ZNF197O14709 1029 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ZNF263O14978 683 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 FOXD2O60548 495 aaPredicted RBP12.87□□□□□ -0.35
CDK9-205ENST00000498339 PRKCBP05771 671 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 FGFR3P22607 806 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CCNE1P24864 410 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 PSMA5P28066 241 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CLCNKBP51801 687 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ROR1Q01973 937 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 SPIRE1Q08AE8 756 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 PRPF4BQ13523 1007 aaKnown RBP12.87□□□□□ -0.35
CDK9-205ENST00000498339 LRRC32Q14392 662 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 NPY5RQ15761 445 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CYP4A22Q5TCH4 519 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 NOSTRINQ8IVI9 506 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ELMOD1Q8N336 334 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 AGXT2Q9BYV1 514 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CXCL16Q9H2A7 254 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 PDZD7Q9H5P4 517 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 SLITRK6Q9H5Y7 841 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 CYP4F11Q9HBI6 524 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
CDK9-205ENST00000498339 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 ANKEF1Q9NU02 776 aa12.87□□□□□ -0.35
CDK9-205ENST00000498339 SLITRK3O94933 977 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 XBP1P17861 261 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 PSMC3P17980 439 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 RARRES1P49788 294 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 MAPK6Q16659 721 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 IQCEQ6IPM2 695 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 VITQ6UXI7 678 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 LONP2Q86WA8 852 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
CDK9-205ENST00000498339 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
CDK9-205ENST00000498339 FAM200AQ8TCP9 573 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms