RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SYNCQ9H7C4 482 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 DPP3Q9NY33 737 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 KLK14Q9P0G3 267 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 PCDHA11Q9Y5I1 949 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 KRT5P13647 590 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CD19P15391 556 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CYP3A5P20815 502 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 EXOC3L4Q17RC7 722 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 MARCH8Q5T0T0 291 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 ZNF280DQ6N043 979 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CDR2LQ86X02 465 aaPredicted RBP9.3□□□□□ -0.92
U2AF1-212ENST00000496462 SLC9A9Q8IVB4 645 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 HERC6Q8IVU3 1022 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 DNAH12Q6ZR08 3092 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 ZNFX1Q9P2E3 1918 aaKnown RBP9.3□□□□□ -0.92
U2AF1-212ENST00000496462 POMCP01189 267 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 COBLL1Q53SF7 1204 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 SCFD1Q8WVM8 642 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 FAM161BQ96MY7 647 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 PDZD7Q9H5P4 517 aa9.3□□□□□ -0.92
U2AF1-212ENST00000496462 CXCL10P02778 98 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 CPB1P15086 417 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 RFX1P22670 979 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 ENPEPQ07075 957 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 DRP2Q13474 957 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
U2AF1-212ENST00000496462 FBXL13Q8NEE6 735 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 PIDD1Q9HB75 910 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 NXF1Q9UBU9 619 aaKnown RBP9.29□□□□□ -0.92
U2AF1-212ENST00000496462 FRMD3A2A2Y4 597 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 MED7O43513 233 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 SCNN1GP51170 649 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 ADAM17P78536 824 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 GPT2Q8TD30 523 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 BSNDQ8WZ55 320 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
U2AF1-212ENST00000496462 TUBGCP2Q9BSJ2 902 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 TMEM8AQ9HCN3 771 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 MRPL17Q9NRX2 175 aaKnown RBP9.29□□□□□ -0.92
U2AF1-212ENST00000496462 GRIN2DO15399 1336 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 A0A087X0B3 334 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 A0A0B4J269 797 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 EDIL3O43854 480 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 AKAP5P24588 427 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 MLH1P40692 756 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 OR6B3Q8NGW1 331 aa9.29□□□□□ -0.92
U2AF1-212ENST00000496462 NCK2O43639 380 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 STBD1O95210 358 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 IGFBP4P22692 258 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 ARPP19P56211 112 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 PLD1Q13393 1074 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 PSMD6Q15008 389 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 USP41Q3LFD5 358 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 NT5DC1Q5TFE4 455 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 C4orf50Q6ZRC1 276 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
U2AF1-212ENST00000496462 PLVAPQ9BX97 442 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 LMAN2LQ9H0V9 348 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 KAT6AQ92794 2004 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 CXCL8P10145 99 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 LHX1P48742 406 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 CYP24A1Q07973 514 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 STILQ15468 1287 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 NFE2Q16621 373 aaPredicted RBP9.28□□□□□ -0.92
U2AF1-212ENST00000496462 NFIL3Q16649 462 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TIGD5Q53EQ6 642 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 EEF1DP3Q658K8 133 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 IQCEQ6IPM2 695 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 CENPPQ6IPU0 288 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 DPH6Q7L8W6 267 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 PPM1KQ8N3J5 372 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TIFAQ96CG3 184 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 LRCH3Q96II8 777 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 BPIFA3Q9BQP9 254 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 IFT122Q9HBG6 1241 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 LAMA3Q16787 3333 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TRIM43BA6NCK2 446 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 B4GALT5O43286 388 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 HOXC8P31273 242 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 WDR5P61964 334 aaKnown RBP9.28□□□□□ -0.92
U2AF1-212ENST00000496462 MAPK7Q13164 816 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 NCOA4Q13772 614 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TMEM86AQ8N2M4 240 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TRIM43Q96BQ3 446 aaPredicted RBP9.28□□□□□ -0.92
U2AF1-212ENST00000496462 ZBTB10Q96DT7 871 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 CBWD1Q9BRT8 395 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 VPS16Q9H269 839 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
U2AF1-212ENST00000496462 INTS13Q9NVM9 706 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 TMEM63CQ9P1W3 806 aa9.28□□□□□ -0.92
U2AF1-212ENST00000496462 PODXLO00592 558 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 ADH1AP07327 375 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 UBE3AQ05086 875 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 PTK2Q05397 1052 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 RAPGEF1Q13905 1077 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 TDRD12Q587J7 1177 aaKnown RBP9.27□□□□□ -0.92
U2AF1-212ENST00000496462 TMEM240Q5SV17 173 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 ANKS3Q6ZW76 656 aa9.27□□□□□ -0.92
U2AF1-212ENST00000496462 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms