RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ANKS1AQ92625 1134 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 PGBD4Q96DM1 585 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 TCF25Q9BQ70 676 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 BTBD1Q9H0C5 482 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 C11orf54Q9H0W9 315 aaPredicted RBP6.73□□□□□ -1.33
SSR3-208ENST00000496050 ATP6V0A4Q9HBG4 840 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 DAAM1Q9Y4D1 1078 aa6.73□□□□□ -1.33
SSR3-208ENST00000496050 ATRNL1Q5VV63 1379 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 NT5C1B-RDH14C9J2C7 533 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 HOXA3O43365 443 aaPredicted RBP6.72□□□□□ -1.33
SSR3-208ENST00000496050 ZKSCAN1P17029 563 aaPredicted RBP6.72□□□□□ -1.33
SSR3-208ENST00000496050 SLC7A1P30825 629 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 PABPC1LQ4VXU2 614 aaKnown RBP6.72□□□□□ -1.33
SSR3-208ENST00000496050 AFMIDQ63HM1 303 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 OGFOD2Q6N063 350 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 ADGRE4PQ86SQ3 457 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 PLXDC1Q8IUK5 500 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 LGI4Q8N135 537 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 SHCBP1Q8NEM2 672 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 ARL8AQ96BM9 186 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 ARPC5LQ9BPX5 153 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 MRPL46Q9H2W6 279 aaKnown RBP6.72□□□□□ -1.33
SSR3-208ENST00000496050 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 SEC61A2Q9H9S3 476 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 TAGLN3Q9UI15 199 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
SSR3-208ENST00000496050 SNX13Q9Y5W8 968 aa6.72□□□□□ -1.33
SSR3-208ENST00000496050 NOBOXO60393 691 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 SNRPA1P09661 255 aaKnown RBP6.71□□□□□ -1.34
SSR3-208ENST00000496050 KITP10721 976 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 ATP5JP18859 108 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 PIK3CBP42338 1070 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 TM4SF4P48230 202 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 PPP2CBP62714 309 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 PPP2CAP67775 309 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 RIN1Q13671 783 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 SURF1Q15526 300 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 DACT2Q5SW24 774 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 C10orf62Q5T681 223 aaPredicted RBP6.71□□□□□ -1.34
SSR3-208ENST00000496050 ARHGEF18Q6ZSZ5 1173 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 COL23A1Q86Y22 540 aaPredicted RBP6.71□□□□□ -1.34
SSR3-208ENST00000496050 FAM90A1Q86YD7 464 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 IL17RDQ8NFM7 739 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 NLGN4YQ8NFZ3 816 aaPredicted RBP6.71□□□□□ -1.34
SSR3-208ENST00000496050 CFHR4Q92496 578 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 BORCS6Q96GS4 357 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 MRI1Q9BV20 369 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 OGDHLQ9ULD0 1010 aa6.71□□□□□ -1.34
SSR3-208ENST00000496050 IFRD1O00458 451 aaPredicted RBP6.7□□□□□ -1.34
SSR3-208ENST00000496050 PJA2O43164 708 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 B4GALT3O60512 393 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 CD1AP06126 327 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 SETSIPP0DME0 302 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 CR2P20023 1033 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 PIK3CGP48736 1102 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 BTKQ06187 659 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 CNGA2Q16280 664 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 FAM111BQ6SJ93 734 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 SEM1Q6ZVN7 128 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 PPP1R3BQ86XI6 285 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 AOPEPQ8N6M6 819 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 ENAHQ8N8S7 591 aaPredicted RBP6.7□□□□□ -1.34
SSR3-208ENST00000496050 TNPO1Q92973 898 aaKnown RBP6.7□□□□□ -1.34
SSR3-208ENST00000496050 NEIL1Q96FI4 390 aaPredicted RBP6.7□□□□□ -1.34
SSR3-208ENST00000496050 CEP95Q96GE4 821 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 RSAD1Q9HA92 442 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.7□□□□□ -1.34
SSR3-208ENST00000496050 ZDHHC8Q9ULC8 765 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 HDAC5Q9UQL6 1122 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 DMTF1Q9Y222 760 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 USP19O94966 1318 aa6.7□□□□□ -1.34
SSR3-208ENST00000496050 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
SSR3-208ENST00000496050 B5MCH6 92 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 MYO1FO00160 1098 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 GRM6O15303 877 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 GNAI3P08754 354 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 SERPINB3P29508 390 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 SUMO3P55854 103 aaPredicted RBP6.69□□□□□ -1.34
SSR3-208ENST00000496050 CLRN1P58418 232 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 GNAI1P63096 354 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 FMO1Q01740 532 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 DCBLD1Q8N8Z6 715 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 LMF1Q96S06 567 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 KCNH6Q9H252 994 aa6.69□□□□□ -1.34
SSR3-208ENST00000496050 TBKBP1A7MCY6 615 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 RASA4BC9J798 803 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 MATN2O00339 956 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 WNT10BO00744 389 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 KIAA0391O15091 583 aaKnown RBP6.68□□□□□ -1.34
SSR3-208ENST00000496050 RASA4O43374 803 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 CDC14BO60729 498 aa6.68□□□□□ -1.34
SSR3-208ENST00000496050 CNOT4O95628 575 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms