RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CASTOR2A6NHX0 329 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 LACTBL1A8MY62 500 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 COBLL1Q53SF7 1204 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 PDE12Q6L8Q7 609 aaKnown RBP21.78■■□□□ 1.08
LMO4-204ENST00000495705 DDX53Q86TM3 631 aaKnown RBP21.78■■□□□ 1.08
LMO4-204ENST00000495705 XXYLT1Q8NBI6 393 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 FAM212AQ96EL1 285 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 KIF12Q96FN5 646 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 DDX27Q96GQ7 796 aaKnown RBP21.78■■□□□ 1.08
LMO4-204ENST00000495705 MARCH5Q9NX47 278 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 RBAKQ9NYW8 714 aaPredicted RBP21.78■■□□□ 1.08
LMO4-204ENST00000495705 UBQLN1Q9UMX0 589 aaKnown RBP21.78■■□□□ 1.08
LMO4-204ENST00000495705 DERAQ9Y315 318 aa21.78■■□□□ 1.08
LMO4-204ENST00000495705 GOLGA8IPA6NC78 632 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 GOLGA8JA6NMD2 632 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 CLIC2O15247 247 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 CALUO43852 315 aaPredicted RBP21.77■■□□□ 1.08
LMO4-204ENST00000495705 CYP3A5P20815 502 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 DNAJB1P25685 340 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 CAMK1Q14012 370 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 NOC3LQ8WTT2 800 aaKnown RBP21.77■■□□□ 1.08
LMO4-204ENST00000495705 TMEM174Q8WUU8 243 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 BCL7CQ8WUZ0 217 aaPredicted RBP21.77■■□□□ 1.08
LMO4-204ENST00000495705 CLSTN2Q9H4D0 955 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 ADAM28Q9UKQ2 775 aa21.77■■□□□ 1.08
LMO4-204ENST00000495705 ZNF233A6NK53 670 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 TMEM189-UBE2V1I3L0A0 370 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 PPP1R2P41236 205 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 CYP2J2P51589 502 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 SOX4Q06945 474 aaPredicted RBP21.76■■□□□ 1.07
LMO4-204ENST00000495705 BMS1Q14692 1282 aaKnown RBP21.76■■□□□ 1.07
LMO4-204ENST00000495705 ZBTB6Q15916 424 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 CAMK4Q16566 473 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 NT5DC4Q86YG4 428 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 SLC9A9Q8IVB4 645 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 ZSWIM2Q8NEG5 633 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 FBXL18Q96ME1 805 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 GOLGA2P5Q9HBQ8 144 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 MAN1B1Q9UKM7 699 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 MAPK8IP1Q9UQF2 711 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 TRAF3IP3Q9Y228 551 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 MYO7AQ13402 2215 aa21.76■■□□□ 1.07
LMO4-204ENST00000495705 RPL9P32969 192 aaKnown RBP21.75■■□□□ 1.07
LMO4-204ENST00000495705 SPAG1Q07617 926 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 STIM1Q13586 685 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 MYBPC2Q14324 1141 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 TMEM132DQ14C87 1099 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 SURF1Q15526 300 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 UPP1Q16831 310 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 JADE1Q6IE81 842 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 DCLRE1AQ6PJP8 1040 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 SMYD4Q8IYR2 804 aaPredicted RBP21.75■■□□□ 1.07
LMO4-204ENST00000495705 TRIML1Q8N9V2 468 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 BEST2Q8NFU1 509 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 PPP2R3CQ969Q6 453 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 C18orf25Q96B23 403 aaPredicted RBP21.75■■□□□ 1.07
LMO4-204ENST00000495705 TCF25Q9BQ70 676 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 PAAF1Q9BRP4 392 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 NUP62CLQ9H1M0 184 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 NSUN3Q9H649 340 aaKnown RBP21.75■■□□□ 1.07
LMO4-204ENST00000495705 NGRNQ9NPE2 291 aaKnown RBP21.75■■□□□ 1.07
LMO4-204ENST00000495705 ENTPD7Q9NQZ7 604 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 KIAA1468Q9P260 1216 aa21.75■■□□□ 1.07
LMO4-204ENST00000495705 SF3B1O75533 1304 aaKnown RBP eCLIP21.75■■□□□ 1.07
LMO4-204ENST00000495705 FSCN2O14926 492 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 EXOC3O60645 756 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 TADA2AO75478 443 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 KIF4AO95239 1232 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 MBD3O95983 291 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 NR3C1P04150 777 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 CLCNKBP51801 687 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 ERVFC1P60507 584 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 SNRNP35Q16560 246 aaKnown RBP21.74■■□□□ 1.07
LMO4-204ENST00000495705 NFIL3Q16649 462 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 FUT10Q6P4F1 479 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 TMC7Q7Z402 723 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 CBWD2Q8IUF1 395 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 VPS52Q8N1B4 723 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 MICALL1Q8N3F8 863 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 MAFAQ8NHW3 353 aaPredicted RBP21.74■■□□□ 1.07
LMO4-204ENST00000495705 MICAL1Q8TDZ2 1067 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 HERC2P3Q9BVR0 1158 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 ZBP1Q9H171 429 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 CACNG4Q9UBN1 327 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 TUBGCP4Q9UGJ1 667 aa21.74■■□□□ 1.07
LMO4-204ENST00000495705 F8W810 466 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 PODXLO00592 558 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 B3GAT3O94766 335 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 CSPG5O95196 566 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 EFEMP2O95967 443 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 SOD2P04179 222 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 NFICP08651 508 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 LRPAP1P30533 357 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 IRS1P35568 1242 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 PRCPP42785 496 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 ELAVL2Q12926 359 aaKnown RBP21.73■■□□□ 1.07
LMO4-204ENST00000495705 MORC3Q14149 939 aa21.73■■□□□ 1.07
LMO4-204ENST00000495705 SMC1AQ14683 1233 aaKnown RBP21.73■■□□□ 1.07
LMO4-204ENST00000495705 SPATA1Q5VX52 437 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms