RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 PDGFCQ9NRA1 345 aa6.71□□□□□ -1.33
NF1-215ENST00000493220 ASGR1P07306 291 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 GHRP10912 638 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 MAN1A1P33908 653 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 BTG3Q14201 252 aaPredicted RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 FBXO46Q6PJ61 603 aaPredicted RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 DLK2Q6UY11 383 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ZNF365Q70YC5 407 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ZNF677Q86XU0 584 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 NIFKQ9BYG3 293 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 NIF3L1Q9GZT8 377 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ASB7Q9H672 318 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 RSAD1Q9HA92 442 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 HPSEQ9Y251 543 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 PCDHA2Q9Y5H9 948 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 SNX9Q9Y5X1 595 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 CACNA1SQ13698 1873 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 TUBBP07437 444 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 CC2D1AQ6P1N0 951 aaPredicted RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 BZW1Q7L1Q6 419 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 HPDLQ96IR7 371 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 MED15Q96RN5 788 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 STMN4Q9H169 189 aaPredicted RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 TMEM51Q9NW97 253 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 APEX2Q9UBZ4 518 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 LSM7Q9UK45 103 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 KIAA1257Q9ULG3 409 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 DNM1LO00429 736 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ITGB5P18084 799 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ADORA2BP29275 332 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 SOX5P35711 763 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 RNASE9P60153 205 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 E2F5Q15329 346 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 PTPROQ16827 1216 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 TMCO3Q6UWJ1 677 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 BTN2A1Q7KYR7 527 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 LCA5Q86VQ0 697 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 CCDC89Q8N998 374 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 PURBQ96QR8 312 aaKnown RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 PPP1R9BQ96SB3 815 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 NT5C1AQ9BXI3 368 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 POLD4Q9HCU8 107 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 GPRC5CQ9NQ84 441 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 ZKSCAN5Q9Y2L8 839 aa6.71□□□□□ -1.34
NF1-215ENST00000493220 MAFBQ9Y5Q3 323 aaPredicted RBP6.71□□□□□ -1.34
NF1-215ENST00000493220 FSD2A1L4K1 749 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 COG7P83436 770 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 HYIQ5T013 277 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ITIH5Q86UX2 942 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ZNF507Q8TCN5 953 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 RSAD2Q8WXG1 361 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PNMA5Q96PV4 448 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 HDAC6Q9UBN7 1215 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 EML1O00423 815 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 FOXN1O15353 648 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 APOEP02649 317 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GJB1P08034 283 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PFKMP08237 780 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GNL1P36915 607 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 LMNB2Q03252 620 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ST3GAL1Q11201 340 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 WDR72Q3MJ13 1102 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 CFAP221Q4G0U5 840 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 KIAA1755Q5JYT7 1200 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 BTBD8Q5XKL5 378 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 LRRC31Q6UY01 552 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 HAS1Q92839 578 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 KIFC3Q9BVG8 833 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 KIF9Q9HAQ2 790 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PLEKHA5Q9HAU0 1116 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 CYP3A43Q9HB55 503 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 VAV3Q9UKW4 847 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 TNFSF13BQ9Y275 285 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 UTP11Q9Y3A2 253 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 EPN1Q9Y6I3 576 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 MAPK13O15264 365 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PPM1AP35813 382 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 PSMC6P62333 389 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 SLMAPQ14BN4 828 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 C1orf228Q6PIY5 440 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 C17orf99Q6UX52 265 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 LRRC8DQ7L1W4 858 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GIMAP7Q8NHV1 300 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 CDK5RAP1Q96SZ6 601 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 NHEJ1Q9H9Q4 299 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 WDR35Q9P2L0 1181 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GIT1Q9Y2X7 761 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 FAM169AQ9Y6X4 670 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 SYNJ2BP-COX16A0A087WUM0 186 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 GOLGA8SH3BPF8 625 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 HLA-DRAP01903 254 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ITGB3P05106 788 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 RPL10AP62906 217 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 CYP24A1Q07973 514 aa6.7□□□□□ -1.34
NF1-215ENST00000493220 ITGB3BPQ13352 177 aaPredicted RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 EARS2Q5JPH6 523 aaKnown RBP6.7□□□□□ -1.34
NF1-215ENST00000493220 TDRD10Q5VZ19 366 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms