RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MARCH5Q9NX47 278 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 HSPBP1Q9NZL4 362 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 STK39Q9UEW8 545 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 LAMA3Q16787 3333 aa15.19■□□□□ 0.02
CCM2-217ENST00000492883 GBF1Q92538 1859 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
CCM2-217ENST00000492883 B3GAT3O94766 335 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 CXCL14O95715 111 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 ADRB2P07550 413 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 CYP2J2P51589 502 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 CLCNKBP51801 687 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 CAMK4Q16566 473 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 ZSWIM2Q8NEG5 633 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 PPP2R3CQ969Q6 453 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 KIAA1586Q9HCI6 787 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 RBAKQ9NYW8 714 aaPredicted RBP15.18■□□□□ 0.02
CCM2-217ENST00000492883 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
CCM2-217ENST00000492883 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
CCM2-217ENST00000492883 ZNF233A6NK53 670 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 F8W810 466 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 IL18RAPO95256 599 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 RPL9P32969 192 aaKnown RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 SOX4Q06945 474 aaPredicted RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 UPP1Q16831 310 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 TCEAL5Q5H9L2 206 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 ZNF658Q5TYW1 1059 aaPredicted RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 PLPP4Q5VZY2 271 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 SMYD4Q8IYR2 804 aaPredicted RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 GUF1Q8N442 669 aaKnown RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 XXYLT1Q8NBI6 393 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 RDH13Q8NBN7 331 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 SPATA20Q8TB22 786 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 HASPINQ8TF76 798 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 TUBGCP4Q9UGJ1 667 aa15.17■□□□□ 0.02
CCM2-217ENST00000492883 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
CCM2-217ENST00000492883 PODXLO00592 558 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 PDXKO00764 312 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 CALUO43852 315 aaPredicted RBP15.16■□□□□ 0.02
CCM2-217ENST00000492883 EXOC3O60645 756 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 KIF4AO95239 1232 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 NFICP08651 508 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 CTSAP10619 480 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 CYP3A5P20815 502 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
CCM2-217ENST00000492883 TMEM132DQ14C87 1099 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 ZBTB6Q15916 424 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 KIAA1841Q6NSI8 718 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 RBM23Q86U06 439 aaKnown RBP15.16■□□□□ 0.02
CCM2-217ENST00000492883 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 BRSK2Q8IWQ3 736 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 C12orf56Q8IXR9 622 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 MRPL43Q8N983 215 aaKnown RBP15.16■□□□□ 0.02
CCM2-217ENST00000492883 ZBP1Q9H171 429 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 IGFLR1Q9H665 355 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 TLE6Q9H808 572 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 MAN1B1Q9UKM7 699 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 DERAQ9Y315 318 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 PCDHGC5Q9Y5F6 944 aa15.16■□□□□ 0.02
CCM2-217ENST00000492883 SF3B1O75533 1304 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■■■■■ 133.7
CCM2-217ENST00000492883 TCHHQ07283 1943 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 FSCN2O14926 492 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 TRAPPC3O43617 180 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 SOD2P04179 222 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 PRCPP42785 496 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
CCM2-217ENST00000492883 SURF1Q15526 300 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 SNRNP35Q16560 246 aaKnown RBP15.15■□□□□ 0.02
CCM2-217ENST00000492883 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 FAM171A1Q5VUB5 890 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 TAS1R1Q7RTX1 841 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 ADGRD2Q7Z7M1 963 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 CEP57Q86XR8 500 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 AUTS2Q8WXX7 1259 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 VN1R3Q9BXE9 311 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 GPR62Q9BZJ7 368 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 MRPL17Q9NRX2 175 aaKnown RBP15.15■□□□□ 0.02
CCM2-217ENST00000492883 SSX2IPQ9Y2D8 614 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 NUB1Q9Y5A7 615 aa15.15■□□□□ 0.02
CCM2-217ENST00000492883 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
CCM2-217ENST00000492883 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
CCM2-217ENST00000492883 HIDE1A8MVS5 230 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 TMEM189-UBE2V1I3L0A0 370 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 BIN1O00499 593 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 C2CD2LO14523 706 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 PER2O15055 1255 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 NR3C1P04150 777 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 URODP06132 367 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 LRPAP1P30533 357 aa15.14■□□□□ 0.01
CCM2-217ENST00000492883 NRIP1P48552 1158 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms