RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 CASTOR2A6NHX0 329 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 LRRIQ3A6PVS8 624 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 INPPL1O15357 1258 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 IL18RAPO95256 599 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 KCNE1P15382 129 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PBX3P40426 434 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 TFAMQ00059 246 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 MYL5Q02045 173 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 GRIK3Q13003 919 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 TMEM132DQ14C87 1099 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PSMD6Q15008 389 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 IQCB1Q15051 598 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 NAB2Q15742 525 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 DCAF17Q5H9S7 520 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 CT47A1Q5JQC4 288 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 LUZP1Q86V48 1076 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 IRF2BP1Q8IU81 584 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 LRRC43Q8N309 656 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 OR5B17Q8NGF7 314 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 FNBP1Q96RU3 617 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 RAD9AQ99638 391 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PAAF1Q9BRP4 392 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 NAT10Q9H0A0 1025 aaKnown RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 CWH43Q9H720 699 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 PLEKHA5Q9HAU0 1116 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 RNF216Q9NWF9 866 aaPredicted RBP11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 DNAJB4Q9UDY4 337 aa11.67□□□□□ -0.54
CACNA1C-227ENST00000491104 SCN1AP35498 2009 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 MAPK13O15264 365 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 ZC3H11AO75152 810 aaKnown RBP eCLIP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 THP07101 528 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 CA3P07451 260 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 KRT13P13646 458 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 TNNI1P19237 187 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 IGFBP6P24592 240 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 VAMP7P51809 220 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 BFSP1Q12934 665 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 SPOUT1Q5T280 376 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 CD302Q8IX05 232 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 FIBCD1Q8N539 461 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 RNF214Q8ND24 703 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 PARD3BQ8TEW8 1205 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 FAM193BQ96PV7 902 aaPredicted RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 BPIFA3Q9BQP9 254 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 MRPL9Q9BYD2 267 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 MTMR12Q9C0I1 747 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 HSD3B7Q9H2F3 369 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 THAP9Q9H5L6 903 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 ASB7Q9H672 318 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 UBQLN1Q9UMX0 589 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 INSL6Q9Y581 213 aa11.66□□□□□ -0.54
CACNA1C-227ENST00000491104 LINC01553A4QN01 128 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 KCNJ18B7U540 433 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 NT5C1B-RDH14C9J2C7 533 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 F8W810 466 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 PPEF2O14830 753 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 FGFR1OPO95684 399 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 TMEM191BP0C7N4 346 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 LINC00271P0C7V0 271 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 GCLMP48507 274 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 SLC11A1P49279 550 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 POU5F1Q01860 360 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 PPP3CAQ08209 521 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 DSC1Q08554 894 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 TUSC3Q13454 348 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 SURF1Q15526 300 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 ZBTB6Q15916 424 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 CDKAL1Q5VV42 579 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 INTS8Q75QN2 995 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 GAS2L3Q86XJ1 694 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 WDR49Q8IV35 697 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 FAM200AQ8TCP9 573 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 TMC2Q8TDI7 906 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 HASPINQ8TF76 798 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 KANSL3Q9P2N6 904 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 ARMCX3Q9UH62 379 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 PRG3Q9Y2Y8 225 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 C2CD2Q9Y426 696 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 PCDHA11Q9Y5I1 949 aa11.65□□□□□ -0.54
CACNA1C-227ENST00000491104 PLXNA4Q9HCM2 1894 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms