RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 CSF1RP07333 972 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 RSPH10BP0C881 870 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 NSFP46459 744 aaKnown RBP12.19□□□□□ -0.46
PCSK9-202ENST00000490692 GSTO1P78417 241 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 CASC4Q6P4E1 433 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 SCFD1Q8WVM8 642 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 FGFBP2Q9BYJ0 223 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 PREBQ9HCU5 417 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 UBAP1Q9NZ09 502 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 FOXN3O00409 490 aaPredicted RBP12.19□□□□□ -0.46
PCSK9-202ENST00000490692 LPXNO60711 386 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 USP1O94782 785 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 NOL4O94818 638 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 CFBP00751 764 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 ITIH2P19823 946 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 CENPUQ71F23 418 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 PRELID2Q8N945 189 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 DNAJC1Q96KC8 554 aaKnown RBP12.19□□□□□ -0.46
PCSK9-202ENST00000490692 PNMA5Q96PV4 448 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 YIPF2Q9BWQ6 316 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
PCSK9-202ENST00000490692 MAD1L1Q9Y6D9 718 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
PCSK9-202ENST00000490692 PSMG1O95456 288 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 IGBP1P78318 339 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 PKN2Q16513 984 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 DSTYKQ6XUX3 929 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 FRMD5Q7Z6J6 570 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 GALNT4Q8N4A0 578 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 EIF1ADQ8N9N8 165 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 ANKRD27Q96NW4 1050 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 FBXO6Q9NRD1 293 aaPredicted RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 WDR35Q9P2L0 1181 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 NOL3O60936 208 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 PEX11AO75192 247 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 TJP3O95049 919 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 MAN1A1P33908 653 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 CYLC2Q14093 348 aaPredicted RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 TNFRSF25Q93038 417 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 TRIM56Q9BRZ2 755 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 MXD3Q9BW11 206 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 DMAP1Q9NPF5 467 aaPredicted RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 MYH6P13533 1939 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 TMCC1O94876 653 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 NPTXRO95502 500 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 MXI1P50539 228 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 ARSEP51690 589 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 FUT2Q10981 343 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
PCSK9-202ENST00000490692 DAB2IPQ5VWQ8 1189 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 ACAP3Q96P50 834 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 SH2D3AQ9BRG2 576 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 PHACTR1Q9C0D0 580 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 WNT8AQ9H1J5 351 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 CAMTA1Q9Y6Y1 1673 aa12.18□□□□□ -0.46
PCSK9-202ENST00000490692 TCRBV7S2A1N4TA0A589 114 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 ANKRD63C9JTQ0 380 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 NOP56O00567 594 aaKnown RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 RFC4P35249 363 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 PPP2R5DQ14738 602 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 DRAXINQ8NBI3 349 aaPredicted RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 AGR3Q8TD06 166 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 CFAP36Q96G28 342 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 LRGUKQ96M69 825 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 C2orf71A6NGG8 1288 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 LCA5LO95447 670 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 KRT1P04264 644 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 MYL2P10916 166 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 HIC1Q14526 733 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 ACAP1Q15027 740 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 KRT80Q6KB66 452 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 C16orf87Q6PH81 154 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 ASAP3Q8TDY4 903 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 CEP95Q96GE4 821 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 C12orf65Q9H3J6 166 aaKnown RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 ACP6Q9NPH0 428 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 LMCD1Q9NZU5 365 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 COPEO14579 308 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 PDE5AO76074 875 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 RPA3P35244 121 aaPredicted RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 FMO5P49326 533 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 Q4G0T1 1027 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 NXNQ6DKJ4 435 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
PCSK9-202ENST00000490692 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
PCSK9-202ENST00000490692 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms