RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TIFAQ96CG3 184 aa5□□□□□ -1.61
CD46-216ENST00000490278 FAM167AQ96KS9 214 aa5□□□□□ -1.61
CD46-216ENST00000490278 C20orf173Q96LM9 149 aa5□□□□□ -1.61
CD46-216ENST00000490278 MYOCQ99972 504 aa5□□□□□ -1.61
CD46-216ENST00000490278 LRFN3Q9BTN0 628 aa5□□□□□ -1.61
CD46-216ENST00000490278 BDH2Q9BUT1 245 aa5□□□□□ -1.61
CD46-216ENST00000490278 C11orf54Q9H0W9 315 aaPredicted RBP5□□□□□ -1.61
CD46-216ENST00000490278 ABCF2Q9UG63 623 aa5□□□□□ -1.61
CD46-216ENST00000490278 SLC23A1Q9UHI7 598 aa5□□□□□ -1.61
CD46-216ENST00000490278 RAPGEFL1Q9UHV5 662 aa5□□□□□ -1.61
CD46-216ENST00000490278 CLCA2Q9UQC9 943 aa5□□□□□ -1.61
CD46-216ENST00000490278 NCANO14594 1321 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 PRR5-ARHGAP8B1AHC4 643 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 H3BUI4 141 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 PRRG2O14669 202 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 KRT18P05783 430 aaKnown RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 FTH1P19P0C7X4 201 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 TYRP14679 529 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 AGFG1P52594 562 aaKnown RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 RAP2BP61225 183 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 NKX6-1P78426 367 aaPredicted RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 LLGL1Q15334 1064 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 ANO6Q4KMQ2 910 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 PABPC1LQ4VXU2 614 aaKnown RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 METTL24Q5JXM2 366 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 ERICH6BQ5W0A0 696 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 CCSAPQ6IQ19 270 aaPredicted RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 EFCAB12Q6NXP0 572 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 ZNF529Q6P280 563 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 NPNTQ6UXI9 565 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 GPRIN1Q7Z2K8 1008 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 SRGAP1Q7Z6B7 1085 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 SGMS1Q86VZ5 419 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 GSPT2Q8IYD1 628 aaKnown RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 MB21D1Q8N884 522 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 DCBLD1Q8N8Z6 715 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 OR52N2Q8NGI0 321 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 ZFP28Q8NHY6 868 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 TFAP2CQ92754 450 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 MIEF2Q96C03 454 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 MTFMTQ96DP5 389 aaKnown RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 SLC35A4Q96G79 324 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 FAM89AQ96GI7 184 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 B3GNT5Q9BYG0 378 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 SPON1Q9HCB6 807 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 PNPOQ9NVS9 261 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
CD46-216ENST00000490278 FEZ2Q9UHY8 353 aaPredicted RBP4.99□□□□□ -1.61
CD46-216ENST00000490278 PNPLA7Q6ZV29 1317 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 A0A088AWK7 358 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 A6NNZ2 444 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CAPN14A8MX76 684 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 NT5C1B-RDH14C9J2C7 533 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 F2RL2O00254 374 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 GRM6O15303 877 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CYP27B1O15528 508 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 ZNF623O75123 536 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 POMCP01189 267 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 AMHP03971 560 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 HRGP04196 525 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CD1AP06126 327 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 MTHFD1P11586 935 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 ALAS1P13196 640 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 ACO1P21399 889 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 USP14P54578 494 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 PLP2Q04941 152 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 GALEQ14376 348 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 ICAM4Q14773 271 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 FLYWCH1Q4VC44 716 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 HS1BP3Q53T59 392 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 ATXN7L2Q5T6C5 722 aaPredicted RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 SPTY2D1Q68D10 685 aaPredicted RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 DRICH1Q6PGQ1 229 aaPredicted RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 MAMDC4Q6UXC1 1216 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 Q6ZSN1 163 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CCDC149Q6ZUS6 474 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 KIAA0319LQ8IZA0 1049 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 FAM43AQ8N2R8 423 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 IL17RDQ8NFM7 739 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 NLGN4YQ8NFZ3 816 aaPredicted RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 PLBD2Q8NHP8 589 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CXorf38Q8TB03 319 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 ATXN2LQ8WWM7 1075 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 TTC17Q96AE7 1141 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 NDC1Q9BTX1 674 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 CPEB1Q9BZB8 566 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 ARMT1Q9H993 441 aa4.98□□□□□ -1.61
CD46-216ENST00000490278 SIDT1Q9NXL6 827 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 CNOT11Q9UKZ1 510 aaKnown RBP4.98□□□□□ -1.61
CD46-216ENST00000490278 TCRBV7S2A1N4TA0A589 114 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 CAPN8A6NHC0 703 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 K7ESM1 405 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 TPP1O14773 563 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
CD46-216ENST00000490278 ZBED1O96006 694 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 HK1P19367 917 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 MGAT1P26572 445 aa4.97□□□□□ -1.61
CD46-216ENST00000490278 PRDX5P30044 214 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms