RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 BCAR1P56945 870 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
RAB4A-204ENST00000489342 CXCL9Q07325 125 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ADAM15Q13444 863 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 DCTN1Q14203 1278 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ICAM4Q14773 271 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 HS1BP3Q53T59 392 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ESRP1Q6NXG1 681 aaKnown RBP6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ZNF585AQ6P3V2 769 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 GIMAP6Q6P9H5 292 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 KLHDC10Q6PID8 442 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 OR5AN1Q8NGI8 311 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 DPYSL5Q9BPU6 564 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 DENND2AQ9ULE3 1009 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 SYNPO2Q9UMS6 1093 aa6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
RAB4A-204ENST00000489342 RRP7AQ9Y3A4 280 aaKnown RBP6.32□□□□□ -1.4
RAB4A-204ENST00000489342 ABCC12Q96J65 1359 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 PDE4DIPQ5VU43 2346 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 CA12O43570 354 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 RAB11FIP3O75154 756 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 MAFO75444 373 aaPredicted RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 MYL6BP14649 208 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 NFYCQ13952 458 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 SEPT7Q16181 437 aaKnown RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 TBR1Q16650 682 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 MCM10Q7L590 875 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 USP7Q93009 1102 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 GFM2Q969S9 779 aaKnown RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 PSMD1Q99460 953 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 TEX13AQ9BXU3 409 aaPredicted RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 POFUT1Q9H488 388 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 CNOT7Q9UIV1 285 aaKnown RBP6.31□□□□□ -1.4
RAB4A-204ENST00000489342 HDAC9Q9UKV0 1011 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 VWA7Q9Y334 891 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 NPC1L1Q9UHC9 1359 aa6.31□□□□□ -1.4
RAB4A-204ENST00000489342 ASTN2O75129 1339 aaPredicted RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 ZNF623O75123 536 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 PRPF6O94906 941 aaKnown RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 FKBP9O95302 570 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 HSD3B2P26439 372 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 LSP1P33241 339 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 NOGQ13253 232 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MYBPC3Q14896 1274 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 SUSD4Q5VX71 490 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 TCTN3Q6NUS6 607 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 RGMBQ6NW40 437 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MOB2Q70IA6 237 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 FKBP9P1Q75LS8 142 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 CTU1Q7Z7A3 348 aaKnown RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 PALM2Q8IXS6 379 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 GCDHQ92947 438 aaPredicted RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 LPPQ93052 612 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 FERMT2Q96AC1 680 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 DYDC2Q96IM9 177 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MYL10Q9BUA6 226 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 SPTLC3Q9NUV7 552 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MSRAQ9UJ68 235 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MAPRE3Q9UPY8 281 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 KNSTRNQ9Y448 316 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
RAB4A-204ENST00000489342 MRC1P22897 1456 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 GSG1L2A8MUP6 293 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 ZNF20P17024 532 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 LSSP48449 732 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 SELENOPP49908 381 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 NFKB2Q00653 900 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 DBX2Q6ZNG2 339 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 ESPNLQ6ZVH7 1005 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 RBM17Q96I25 401 aaKnown RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 TRPM7Q96QT4 1865 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 KLC2Q9H0B6 622 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 TMX4Q9H1E5 349 aaPredicted RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 GBA2Q9HCG7 927 aaPredicted RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 DNAI1Q9UI46 699 aa6.29□□□□□ -1.4
RAB4A-204ENST00000489342 RBM8AQ9Y5S9 174 aaKnown RBP6.29□□□□□ -1.4
RAB4A-204ENST00000489342 A0A087X0B3 334 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 YDJCA8MPS7 323 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 GOLGA8BA8MQT2 603 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 PATE3B3GLJ2 98 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 MUSKO15146 869 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 DAPK3O43293 454 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 FOXS1O43638 330 aa6.28□□□□□ -1.4
RAB4A-204ENST00000489342 INSRRP14616 1297 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms