RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 CCDC86Q9H6F5 360 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CEP72Q9P209 647 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 CDY1Q9Y6F8 540 aa6.57□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF638Q14966 1978 aaKnown RBP6.57□□□□□ -1.36
COL4A3-206ENST00000487633 OBSL1O75147 1896 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 J3QKU1 62 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF263O14978 683 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 KHNYNO15037 678 aaKnown RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ATXN7O15265 892 aaPredicted RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 XYLBO75191 536 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 POU2F2P09086 479 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 CD59P13987 128 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 HNRNPLP14866 589 aaKnown RBP eCLIP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ENGP17813 658 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 SDSP20132 328 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 TMOD1P28289 359 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 CLK2P49760 499 aaKnown RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 PDE1AP54750 535 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 RAB33AQ14088 237 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 LRRC32Q14392 662 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 PMS2CLQ68D20 193 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 PLA2G4FQ68DD2 849 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ELMSAN1Q6PJG2 1045 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ARMCX6Q7L4S7 300 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 MFSD6LQ8IWD5 586 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 RIN3Q8TB24 985 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ZSCAN18Q8TBC5 510 aaPredicted RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 SMARCD2Q92925 531 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 TTPALQ9BTX7 342 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 COLEC11Q9BWP8 271 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 KRT23Q9C075 422 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 SCUBE2Q9NQ36 999 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 AVENQ9NQS1 362 aaPredicted RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 IGSF5Q9NSI5 407 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 KANSL3Q9P2N6 904 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 SUCLA2Q9P2R7 463 aaPredicted RBP6.56□□□□□ -1.36
COL4A3-206ENST00000487633 PCDHA10Q9Y5I2 948 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 PLXND1Q9Y4D7 1925 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 TEX15Q9BXT5 2789 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ZMYM2Q9UBW7 1377 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 ANK1P16157 1881 aa6.56□□□□□ -1.36
COL4A3-206ENST00000487633 TSC2P49815 1807 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 CNTNAP2Q9UHC6 1331 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 COL6A6A6NMZ7 2263 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SPTA1P02549 2419 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 MYLKQ15746 1914 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TTLL13PA6NNM8 815 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PTGESO14684 152 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 B4GALT5O43286 388 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 CHMP2AO43633 222 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TSPAN1O60635 241 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 RNF40O75150 1001 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TADA2AO75478 443 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 VNN2O95498 520 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PSAPP07602 524 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 CYP21A2P08686 494 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SRGAP2CP0DJJ0 459 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SKIP12755 728 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PTPN2P17706 415 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TKTP29401 623 aaKnown RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SREBF1P36956 1147 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PTGER3P43115 390 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 BRCC3P46736 316 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 KPNA1P52294 538 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 NPEPPSP55786 919 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 FCHO2Q0JRZ9 810 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TRIM61Q5EBN2 209 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 JAKMIP3Q5VZ66 844 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TRIM68Q6AZZ1 485 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF746Q6NUN9 644 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF654Q8IZM8 581 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SHKBP1Q8TBC3 707 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 RLN3Q8WXF3 142 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PIGKQ92643 395 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 RILPL2Q969X0 211 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TMEM143Q96AN5 459 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 DDX27Q96GQ7 796 aaKnown RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 ZNF577Q9BSK1 485 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SMG9Q9H0W8 520 aaKnown RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 UNC45AQ9H3U1 944 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 PRORYQ9H606 182 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 WRAP73Q9P2S5 460 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 MTRRQ9UBK8 725 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 STK39Q9UEW8 545 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 SEPT9Q9UHD8 586 aaPredicted RBP6.55□□□□□ -1.36
COL4A3-206ENST00000487633 CEP131Q9UPN4 1083 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 USP20Q9Y2K6 914 aa6.55□□□□□ -1.36
COL4A3-206ENST00000487633 TMEM131Q92545 1883 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 CCDC163A0A0D9SF12 145 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 ARHGEF37A1IGU5 675 aa6.54□□□□□ -1.36
COL4A3-206ENST00000487633 FAM149AA5PLN7 773 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms