RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 ATF7IP2Q5U623 682 aa17.82■□□□□ 0.44
SRRT-212ENST00000487311 ALKAL1Q6UXT8 129 aa17.82■□□□□ 0.44
SRRT-212ENST00000487311 NPAS3Q8IXF0 933 aa17.82■□□□□ 0.44
SRRT-212ENST00000487311 CEP120Q8N960 986 aa17.82■□□□□ 0.44
SRRT-212ENST00000487311 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
SRRT-212ENST00000487311 SHDQ96IW2 340 aa17.82■□□□□ 0.44
SRRT-212ENST00000487311 FANCMQ8IYD8 2048 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 SMIM28A0A1B0GU29 152 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 FAM170BA6NMN3 283 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 NRG2O14511 850 aaPredicted RBP17.81■□□□□ 0.44
SRRT-212ENST00000487311 POU2F2P09086 479 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 OR52Z1P0C646 297 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 RBM25P49756 843 aaKnown RBP17.81■□□□□ 0.44
SRRT-212ENST00000487311 NBR1Q14596 966 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 PABPC1LQ4VXU2 614 aaKnown RBP17.81■□□□□ 0.44
SRRT-212ENST00000487311 PDXDC1Q6P996 788 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 MTSS1LQ765P7 747 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 SUMF1Q8NBK3 374 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 MCRS1Q96EZ8 462 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
SRRT-212ENST00000487311 BHMT2Q9H2M3 363 aa17.81■□□□□ 0.44
SRRT-212ENST00000487311 SHISA7A6NL88 538 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 SEC24BO95487 1268 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 PPP2R5AQ15172 486 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 DCAF4L1Q3SXM0 396 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 TAS1R3Q7RTX0 852 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 ACO2Q99798 780 aaKnown RBP17.8■□□□□ 0.44
SRRT-212ENST00000487311 PTPRHQ9HD43 1115 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 KIAA1024Q9UPX6 916 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 BACE2Q9Y5Z0 518 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 ZNF292O60281 2723 aa17.8■□□□□ 0.44
SRRT-212ENST00000487311 K7ERI5 159 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
SRRT-212ENST00000487311 TBC1D4O60343 1298 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 RHOP08100 348 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 CCT6AP40227 531 aaKnown RBP17.79■□□□□ 0.44
SRRT-212ENST00000487311 EFNA5P52803 228 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 OSTNP61366 133 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 PRKCQQ04759 706 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 FZD5Q13467 585 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 UBXN2BQ14CS0 331 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
SRRT-212ENST00000487311 XKR4Q5GH76 650 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 TANGO2Q6ICL3 276 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 IFT74Q96LB3 600 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 LTB4R2Q9NPC1 389 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 SPATA6Q9NWH7 488 aaPredicted RBP17.79■□□□□ 0.44
SRRT-212ENST00000487311 TNFSF13BQ9Y275 285 aa17.79■□□□□ 0.44
SRRT-212ENST00000487311 MRPS23Q9Y3D9 190 aaKnown RBP17.79■□□□□ 0.44
SRRT-212ENST00000487311 MED19A0JLT2 244 aaPredicted RBP17.78■□□□□ 0.44
SRRT-212ENST00000487311 WDR27A2RRH5 827 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 ABLIM3O94929 683 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 MUTP22033 750 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 NPTX2P47972 431 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 ROR1Q01973 937 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 TTC38Q5R3I4 469 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 ZC3H14Q6PJT7 736 aaKnown RBP17.78■□□□□ 0.44
SRRT-212ENST00000487311 ANKS3Q6ZW76 656 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 RTL10Q7L3V2 364 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 CCDC83Q8IWF9 413 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 DAW1Q8N136 415 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 TMEM130Q8N3G9 435 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 ZNF461Q8TAF7 563 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 KIFAP3Q92845 792 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 TCEAL4Q96EI5 215 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 C8orf76Q96K31 380 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 CDT1Q9H211 546 aa17.78■□□□□ 0.44
SRRT-212ENST00000487311 FOXP1Q9H334 677 aaPredicted RBP17.78■□□□□ 0.44
SRRT-212ENST00000487311 MIA3Q5JRA6 1907 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 CCDC169A6NNP5 214 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 E9PMD0 336 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 SEC24AO95486 1093 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 CEBPBP17676 345 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 TARSP26639 723 aaKnown RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 GRM5P41594 1212 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 TOB1P50616 345 aaPredicted RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 FXR2P51116 673 aaKnown RBP eCLIP17.77■□□□□ 0.44
SRRT-212ENST00000487311 PEX3P56589 373 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 CSTF1Q05048 431 aaKnown RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 IL17AQ16552 155 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 VARS2Q5ST30 1063 aaKnown RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 SLC8B1Q6J4K2 584 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 RUBCNQ92622 972 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 C18orf25Q96B23 403 aaPredicted RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 ZBTB45Q96K62 511 aaPredicted RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 UROC1Q96N76 676 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 TARS2Q9BW92 718 aaKnown RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 BCO2Q9BYV7 579 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 OSBPL6Q9BZF3 934 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 DDX19AQ9NUU7 478 aaKnown RBP17.77■□□□□ 0.44
SRRT-212ENST00000487311 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
SRRT-212ENST00000487311 ARHGEF37A1IGU5 675 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 PP2D1A8MPX8 630 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 ABLIM1O14639 778 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 LAMTOR5O43504 91 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 TRAPPC3O43617 180 aa17.76■□□□□ 0.43
SRRT-212ENST00000487311 ECI2O75521 394 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms