RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CDY2AQ9Y6F7 541 aa5.9□□□□□ -1.46
SMC4-218ENST00000486711 COL4A3Q01955 1670 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 GAGE12BA1L429 117 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 DIRC3C9JPN6 131 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 CAND2O75155 1236 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 LTA4HP09960 611 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 HSPA6P17066 643 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 FBLP22087 321 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 AKAP5P24588 427 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 MEF2AQ02078 507 aaPredicted RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 KIF23Q02241 960 aaPredicted RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 TRIM25Q14258 630 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 IFIT1BQ5T764 474 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 GPRIN1Q7Z2K8 1008 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 XYLT1Q86Y38 959 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 CCDC146Q8IYE0 955 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 LILRA3Q8N6C8 439 aaPredicted RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 PPM1NQ8N819 430 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 FATE1Q969F0 183 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 PAWRQ96IZ0 340 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 LRGUKQ96M69 825 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 AIFM3Q96NN9 605 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 SLC2A13Q96QE2 648 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 CDC5LQ99459 802 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 NMRK2Q9NPI5 230 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 GABBR1Q9UBS5 961 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 SAP30BPQ9UHR5 308 aaKnown RBP5.89□□□□□ -1.47
SMC4-218ENST00000486711 ZNHIT2Q9UHR6 403 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 TMPRSS11EQ9UL52 423 aa5.89□□□□□ -1.47
SMC4-218ENST00000486711 TMEM200CA6NKL6 621 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 PRPF3O43395 683 aaKnown RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 OFD1O75665 1012 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 KRT18P05783 430 aaKnown RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 C5AR1P21730 350 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 CCT2P78371 535 aaKnown RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 FAM189BP81408 668 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 APBA1Q02410 837 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 UBE3CQ15386 1083 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 UAP1L1Q3KQV9 507 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 RRP12Q5JTH9 1297 aaKnown RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 DRICH1Q6PGQ1 229 aaPredicted RBP5.88□□□□□ -1.47
SMC4-218ENST00000486711 FAM180AQ6UWF9 173 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 PLXDC1Q8IUK5 500 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 LYSMD2Q8IV50 215 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 BEND2Q8NDZ0 799 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 SPON1Q9HCB6 807 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 AKIP1Q9NQ31 210 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 CHST2Q9Y4C5 530 aa5.88□□□□□ -1.47
SMC4-218ENST00000486711 CCDC194A0A1B0GVG4 234 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 B5MCH6 92 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 ERC2O15083 957 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 LPXNO60711 386 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 PRAMEF4O60810 478 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 DTNBO60941 627 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 ZRANB2O95218 330 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMC4-218ENST00000486711 MGAT1P26572 445 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 ZEB1P37275 1124 aaPredicted RBP5.87□□□□□ -1.47
SMC4-218ENST00000486711 GNALP38405 381 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 PTTG1IPP53801 180 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 USP14P54578 494 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 C19orf54Q5BKX5 351 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 Q6YL49 198 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 PRIMA1Q86XR5 153 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 ARHGEF19Q8IW93 802 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 SUPT20HQ8NEM7 779 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 TSPEARQ8WU66 669 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 VOPP1Q96AW1 172 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 ADI1Q9BV57 179 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 SERHL2Q9H4I8 314 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 PRDM11Q9NQV5 511 aa5.87□□□□□ -1.47
SMC4-218ENST00000486711 EVLQ9UI08 416 aaPredicted RBP5.87□□□□□ -1.47
SMC4-218ENST00000486711 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 VSTM5A8MXK1 200 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 LEFTY2O00292 366 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 PLIN1O60240 522 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 NCR1O76036 304 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 SPATA31D3P0C874 917 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 BMPR1AP36894 532 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 AVPR1BP47901 424 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
SMC4-218ENST00000486711 NHLH2Q02577 135 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 MALLQ13021 153 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 ARHGAP29Q52LW3 1261 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 MUM1L1Q5H9M0 696 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 SLC4A10Q6U841 1118 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 SPATA31D4Q6ZUB0 917 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 SLC41A1Q8IVJ1 513 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 OR10H5Q8NGA6 315 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 ANKFY1Q9P2R3 1169 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 TUBD1Q9UJT1 453 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 DNM3Q9UQ16 869 aa5.86□□□□□ -1.47
SMC4-218ENST00000486711 NDUFA10O95299 355 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 LPOP22079 712 aaPredicted RBP5.85□□□□□ -1.47
SMC4-218ENST00000486711 ADRM1Q16186 407 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 BEAN1Q3B7T3 259 aa5.85□□□□□ -1.47
SMC4-218ENST00000486711 GJC2Q5T442 439 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms