RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RPA1P27694 616 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 CCT6AP40227 531 aaKnown RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 UBXN2BQ14CS0 331 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 ATF7IP2Q5U623 682 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 PHLDB3Q6NSJ2 640 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 POTEHQ6S545 545 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 MAML2Q8IZL2 1156 aaPredicted RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 DCLK2Q8N568 766 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 DDX27Q96GQ7 796 aaKnown RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 C8orf76Q96K31 380 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 PPP4R2Q9NY27 417 aa15.31■□□□□ 0.04
VARS-226ENST00000483275 DNMT3BQ9UBC3 853 aaKnown RBP15.31■□□□□ 0.04
VARS-226ENST00000483275 PP2D1A8MPX8 630 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 C1RP00736 705 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 COL4A2P08572 1712 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 HARSP12081 509 aaKnown RBP15.3■□□□□ 0.04
VARS-226ENST00000483275 CEBPBP17676 345 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 FGFR3P22607 806 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 RAB33AQ14088 237 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 SAFBQ15424 915 aaKnown RBP eCLIP15.3■□□□□ 0.04
VARS-226ENST00000483275 MLF2Q15773 248 aaPredicted RBP15.3■□□□□ 0.04
VARS-226ENST00000483275 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 PABPC1LQ4VXU2 614 aaKnown RBP15.3■□□□□ 0.04
VARS-226ENST00000483275 C1orf210Q8IVY1 113 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
VARS-226ENST00000483275 KIAA1024Q9UPX6 916 aa15.3■□□□□ 0.04
VARS-226ENST00000483275 CCDC169A6NNP5 214 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 HOXA9P31269 272 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 ARPP19P56211 112 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 ELAVL2Q12926 359 aaKnown RBP15.29■□□□□ 0.04
VARS-226ENST00000483275 UPP1Q16831 310 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 ZNF568Q3ZCX4 644 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 MTSS1LQ765P7 747 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 MCRS1Q96EZ8 462 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 ZMAT2Q96NC0 199 aaKnown RBP15.29■□□□□ 0.04
VARS-226ENST00000483275 PLA2G2FQ9BZM2 168 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 CDT1Q9H211 546 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 ANK1P16157 1881 aa15.29■□□□□ 0.04
VARS-226ENST00000483275 SMIM28A0A1B0GU29 152 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 MEFVO15553 781 aaPredicted RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 RHOP08100 348 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 PEX3P56589 373 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 STARD6P59095 220 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 ROR1Q01973 937 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 PPP2R5AQ15172 486 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 SLC44A4Q53GD3 710 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 HAUS3Q68CZ6 603 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 TPRG1Q6ZUI0 275 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 TAS1R3Q7RTX0 852 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 DAW1Q8N136 415 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 C4orf32Q8N8J7 132 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 C18orf25Q96B23 403 aaPredicted RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
VARS-226ENST00000483275 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 SPATA6Q9NWH7 488 aaPredicted RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 MRPS23Q9Y3D9 190 aaKnown RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 ZFP37Q9Y6Q3 630 aaPredicted RBP15.28■□□□□ 0.04
VARS-226ENST00000483275 F5P12259 2224 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 PHLPP2Q6ZVD8 1323 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 KANSL1LA0AUZ9 987 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 E9PMD0 336 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 TMEM189-UBE2V1I3L0A0 370 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 HIP1RO75146 1068 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 CDC25AP30304 524 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 NPTX2P47972 431 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 EFNA5P52803 228 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 RAD51AP2Q09MP3 1159 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
VARS-226ENST00000483275 GRM2Q14416 872 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 SEZ6Q53EL9 994 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 VARS2Q5ST30 1063 aaKnown RBP15.27■□□□□ 0.04
VARS-226ENST00000483275 PDXDC1Q6P996 788 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 KCNK18Q7Z418 384 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 TNFSF13BQ9Y275 285 aa15.27■□□□□ 0.04
VARS-226ENST00000483275 MED19A0JLT2 244 aaPredicted RBP15.26■□□□□ 0.03
VARS-226ENST00000483275 FAM170BA6NMN3 283 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 K7ERI5 159 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 PODXLO00592 558 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 PRRG1O14668 218 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 SEC24AO95486 1093 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 TARSP26639 723 aaKnown RBP15.26■□□□□ 0.03
VARS-226ENST00000483275 GRM5P41594 1212 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 RBM25P49756 843 aaKnown RBP15.26■□□□□ 0.03
VARS-226ENST00000483275 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.033e-12■■■■■ 28.8
VARS-226ENST00000483275 TANGO2Q6ICL3 276 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 ZC3H14Q6PJT7 736 aaKnown RBP15.26■□□□□ 0.03
VARS-226ENST00000483275 TSSK4Q6SA08 328 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 KIFAP3Q92845 792 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 ACO2Q99798 780 aaKnown RBP15.26■□□□□ 0.03
VARS-226ENST00000483275 CORO1BQ9BR76 489 aa15.26■□□□□ 0.03
VARS-226ENST00000483275 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms