RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PTGESO14684 152 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 VAMP7P51809 220 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 SMAD3P84022 425 aaKnown RBP16.62■□□□□ 0.25
CCM2-215ENST00000482714 RNASELQ05823 741 aaKnown RBP16.62■□□□□ 0.25
CCM2-215ENST00000482714 BFSP1Q12934 665 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 TUSC3Q13454 348 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 FAM212AQ96EL1 285 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 UROC1Q96N76 676 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 AAASQ9NRG9 546 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 TBC1D13Q9NVG8 400 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 RWDD3Q9Y3V2 267 aa16.62■□□□□ 0.25
CCM2-215ENST00000482714 MEFVO15553 781 aaPredicted RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 EEF1GP26641 437 aaKnown RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 SCNN1GP51170 649 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 SPAG1Q07617 926 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 DSC1Q08554 894 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 TMEM132DQ14C87 1099 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 FAM117BQ6P1L5 589 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 BEST2Q8NFU1 509 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 CLP1Q92989 425 aaKnown RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 KIF12Q96FN5 646 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 SAMD11Q96NU1 681 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 INTS13Q9NVM9 706 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 MAGEC2Q9UBF1 373 aaPredicted RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 INPP5FQ9Y2H2 1132 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 CITO14578 2027 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 LAMA3Q16787 3333 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 LRRC10BA6NIK2 292 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 PMM2O15305 246 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 POMCP01189 267 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 TNNI1P19237 187 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 LRPAP1P30533 357 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 AFF1P51825 1210 aaKnown RBP16.61■□□□□ 0.25
CCM2-215ENST00000482714 TPM4P67936 248 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 NCAPHQ15003 741 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 IQCB1Q15051 598 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 NAB2Q15742 525 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 JADE1Q6IE81 842 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 COLGALT2Q8IYK4 626 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 CCDC127Q96BQ5 260 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 ANKRD36BP1Q96IX9 119 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 CGRRF1Q99675 332 aa16.61■□□□□ 0.25
CCM2-215ENST00000482714 TNNC2P02585 160 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 RB1P06400 928 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 LAG3P18627 525 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 ALDH7A1P49419 539 aaKnown RBP16.6■□□□□ 0.25
CCM2-215ENST00000482714 DCLRE1AQ6PJP8 1040 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 TMCO2Q7Z6W1 182 aaPredicted RBP16.6■□□□□ 0.25
CCM2-215ENST00000482714 TRIM59Q8IWR1 403 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 EEF2KMTQ96G04 330 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 CWH43Q9H720 699 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 NRDE2Q9H7Z3 1164 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 STK39Q9UEW8 545 aa16.6■□□□□ 0.25
CCM2-215ENST00000482714 P4HA2O15460 535 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 DDHD2O94830 711 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 TMEM191BP0C7N4 346 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
CCM2-215ENST00000482714 TFAMQ00059 246 aaKnown RBP16.59■□□□□ 0.25
CCM2-215ENST00000482714 CDKAL1Q5VV42 579 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 DHX40Q8IX18 779 aaKnown RBP16.59■□□□□ 0.25
CCM2-215ENST00000482714 COLEC11Q9BWP8 271 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 PLVAPQ9BX97 442 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 CBX8Q9HC52 389 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
CCM2-215ENST00000482714 DPP3Q9NY33 737 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 FAN1Q9Y2M0 1017 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
CCM2-215ENST00000482714 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
CCM2-215ENST00000482714 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.24
CCM2-215ENST00000482714 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 RBAK-RBAKDNI3L0D1 243 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 C4BPAP04003 597 aaKnown RBP16.58■□□□□ 0.24
CCM2-215ENST00000482714 GALTP07902 379 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.24
CCM2-215ENST00000482714 GATMP50440 423 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 ZACNQ401N2 412 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 TCP11X2Q5H9J9 407 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 GLRA4Q5JXX5 417 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 KRT39Q6A163 491 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 ZNF280BQ86YH2 543 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 EFCAB13Q8IY85 973 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 PLEKHO2Q8TD55 490 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 SLC35C1Q96A29 364 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 CNOT6LQ96LI5 555 aaKnown RBP16.58■□□□□ 0.24
CCM2-215ENST00000482714 PBX4Q9BYU1 374 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 CXCL16Q9H2A7 254 aa16.58■□□□□ 0.24
CCM2-215ENST00000482714 TMEM8AQ9HCN3 771 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms