RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CLDN3O15551 220 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 BUB1BO60566 1050 aaPredicted RBP15.52■□□□□ 0.08
CHD3-211ENST00000481999 SHOX2O60902 331 aaPredicted RBP15.52■□□□□ 0.08
CHD3-211ENST00000481999 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 FTLP02792 175 aaPredicted RBP15.52■□□□□ 0.08
CHD3-211ENST00000481999 VTNP04004 478 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 HUNKP57058 714 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 EEF1DP3Q658K8 133 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 THNSL1Q8IYQ7 743 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 C2orf69Q8N8R5 385 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 SHCBP1Q8NEM2 672 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 BTBD6Q96KE9 485 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 NT5C1BQ96P26 610 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 CCDC113Q9H0I3 377 aa15.52■□□□□ 0.08
CHD3-211ENST00000481999 CNTNAP2Q9UHC6 1331 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 ZSCAN5CA6NGD5 496 aaPredicted RBP15.52■□□□□ 0.07
CHD3-211ENST00000481999 ASB14A6NK59 587 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 IGF2BP3O00425 579 aaKnown RBP eCLIP15.52■□□□□ 0.07
CHD3-211ENST00000481999 FAM189A1O60320 539 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 ITGBL1O95965 494 aaPredicted RBP15.52■□□□□ 0.07
CHD3-211ENST00000481999 CST3P01034 146 aaPredicted RBP15.52■□□□□ 0.07
CHD3-211ENST00000481999 C4BPAP04003 597 aaKnown RBP15.52■□□□□ 0.07
CHD3-211ENST00000481999 GLI1P08151 1106 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 CYP11B1P15538 503 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 TNNC1P63316 161 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 CCNA1P78396 465 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 RPS6KA1Q15418 735 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 PLPPR4Q7Z2D5 763 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 SRLQ86TD4 932 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 MGAMO43451 1857 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 SIP14410 1827 aa15.52■□□□□ 0.07
CHD3-211ENST00000481999 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 IGKV6-21A0A0C4DH24 114 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 PPFIA4O75335 1185 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 HEXIM1O94992 359 aaKnown RBP15.51■□□□□ 0.07
CHD3-211ENST00000481999 PRKCBP05771 671 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 SMPD1P17405 629 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 COPB2P35606 906 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 PIK3CAP42336 1068 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 FMO1Q01740 532 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 PSMD6Q15008 389 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 ZACNQ401N2 412 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 MAML3Q96JK9 1138 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 SMARCAD1Q9H4L7 1026 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 RRP15Q9Y3B9 282 aaKnown RBP15.51■□□□□ 0.07
CHD3-211ENST00000481999 GUCY2DQ02846 1103 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 KCNV1Q6PIU1 500 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 TSEN2Q8NCE0 465 aaKnown RBP15.51■□□□□ 0.07
CHD3-211ENST00000481999 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 EPB41L5Q9HCM4 733 aa15.51■□□□□ 0.07
CHD3-211ENST00000481999 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
CHD3-211ENST00000481999 PIGRP01833 764 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 MFAP3P55082 362 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 TMEM62Q0P6H9 643 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 IER5Q5VY09 327 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 ANKRD23Q86SG2 305 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 CTNNBL1Q8WYA6 563 aaPredicted RBP15.5■□□□□ 0.07
CHD3-211ENST00000481999 PBKQ96KB5 322 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 KRT12Q99456 494 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 ACO2Q99798 780 aaKnown RBP15.5■□□□□ 0.07
CHD3-211ENST00000481999 ERAP1Q9NZ08 941 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 TMEM110-MUSTN1A8MSY1 372 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 H0YCG3 227 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 MYO1CO00159 1063 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 ABLIM1O14639 778 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 C22orf31O95567 290 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 CARSP49589 748 aaKnown RBP15.5■□□□□ 0.07
CHD3-211ENST00000481999 MAPK6Q16659 721 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 AADACL2Q6P093 401 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 FOXR1Q6PIV2 292 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 C16orf70Q9BSU1 422 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 IFT122Q9HBG6 1241 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 FLRT1Q9NZU1 646 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 NFU1Q9UMS0 254 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 GINS2Q9Y248 185 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 NUB1Q9Y5A7 615 aa15.5■□□□□ 0.07
CHD3-211ENST00000481999 A0A087WZ62 844 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 ESYT3A0FGR9 886 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 KIF4AO95239 1232 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 FGFR4P22455 802 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 CCL14Q16627 93 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 CDCA2Q69YH5 1023 aaPredicted RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 PEX26Q7Z412 305 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 PASD1Q8IV76 773 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 MREGQ8N565 214 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 DDX1Q92499 740 aaKnown RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 CPB2Q96IY4 423 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 FDXACB1Q9BRP7 624 aaPredicted RBP15.49■□□□□ 0.07
CHD3-211ENST00000481999 AP1M1Q9BXS5 423 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 TMEM134Q9H6X4 195 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 MORF4L1Q9UBU8 362 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 TMEM59LQ9UK28 342 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 PMM2O15305 246 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 TOM1L1O75674 476 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 RFX1P22670 979 aa15.49■□□□□ 0.07
CHD3-211ENST00000481999 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms