RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 RAB39AQ14964 217 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 LSM12Q3MHD2 195 aaKnown RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 DACT2Q5SW24 774 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 FAM102AQ5T9C2 384 aaPredicted RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 METRNLQ641Q3 311 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 UBE3BQ7Z3V4 1068 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 GDF7Q7Z4P5 450 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 CATIPQ7Z7H3 387 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 CLPTM1LQ96KA5 538 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 FAM193BQ96PV7 902 aaPredicted RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 ZNF768Q9H5H4 540 aaKnown RBP6.79□□□□□ -1.32
CALD1-219ENST00000480638 TRPM5Q9NZQ8 1165 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 ANKRD6Q9Y2G4 727 aa6.79□□□□□ -1.32
CALD1-219ENST00000480638 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 RPLP2P05387 115 aaKnown RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 POU2F2P09086 479 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 VCAM1P19320 739 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 PDCP20941 246 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 FXR1P51114 621 aaKnown RBP eCLIP6.78□□□□□ -1.32
CALD1-219ENST00000480638 ZNF280AP59817 542 aaPredicted RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 CREMQ03060 361 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 TLE1Q04724 770 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 UBXN2BQ14CS0 331 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 FNDC7Q5VTL7 733 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 USP45Q70EL2 814 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 TTC7BQ86TV6 843 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 RAVER1Q8IY67 606 aaKnown RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 Q8N1X5 172 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 ZNF276Q8N554 614 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 SLC25A43Q8WUT9 341 aaPredicted RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 PHACTR3Q96KR7 559 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 DMRTA2Q96SC8 542 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 SLC46A2Q9BY10 475 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 GTPBP4Q9BZE4 634 aaKnown RBP6.78□□□□□ -1.32
CALD1-219ENST00000480638 CDH19Q9H159 772 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
CALD1-219ENST00000480638 TCRBV7S2A1N4TA0A589 114 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 NPIPB8E9PQR5 432 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 ZNF185O15231 689 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 ITGB1P05556 798 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
CALD1-219ENST00000480638 ALAS1P13196 640 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 NR4A1P22736 598 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 AKAP5P24588 427 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 FAM189BP81408 668 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 ZXDAP98168 799 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 AGAP9Q5VTM2 703 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 GADL1Q6ZQY3 521 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 MED25Q71SY5 747 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 CAMKK2Q96RR4 588 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 CALCOCO1Q9P1Z2 691 aa6.77□□□□□ -1.33
CALD1-219ENST00000480638 USP15Q9Y4E8 981 aaPredicted RBP6.77□□□□□ -1.33
CALD1-219ENST00000480638 KIAA0391O15091 583 aaKnown RBP6.76□□□□□ -1.33
CALD1-219ENST00000480638 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 SLC6A2P23975 617 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 PDCD4Q53EL6 469 aaKnown RBP6.76□□□□□ -1.33
CALD1-219ENST00000480638 RHOT2Q8IXI1 618 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 ZNF483Q8TF39 744 aaPredicted RBP6.76□□□□□ -1.33
CALD1-219ENST00000480638 JPH3Q8WXH2 748 aaPredicted RBP6.76□□□□□ -1.33
CALD1-219ENST00000480638 TEX101Q9BY14 249 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 SLC2A4RGQ9NR83 387 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 GPRC5BQ9NZH0 403 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 ZIM2Q9NZV7 527 aa6.76□□□□□ -1.33
CALD1-219ENST00000480638 PNMA8BQ9ULN7 279 aaPredicted RBP6.76□□□□□ -1.33
CALD1-219ENST00000480638 GRM6O15303 877 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 NARSO43776 548 aaKnown RBP6.75□□□□□ -1.33
CALD1-219ENST00000480638 ZNF202O95125 648 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 CD1AP06126 327 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 SBK3P0C264 359 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 SPATA31D3P0C874 917 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 ZFP36P26651 326 aaKnown RBP6.75□□□□□ -1.33
CALD1-219ENST00000480638 KHDC1Q4VXA5 237 aaKnown RBP6.75□□□□□ -1.33
CALD1-219ENST00000480638 PABPC1LQ4VXU2 614 aaKnown RBP6.75□□□□□ -1.33
CALD1-219ENST00000480638 SPATA31D4Q6ZUB0 917 aa6.75□□□□□ -1.33
CALD1-219ENST00000480638 CDHR4A6H8M9 788 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 LRRC14BA6NHZ5 514 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 RFPL1O75677 317 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 NCR1O76036 304 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 HAUS5O94927 633 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 PRSS23O95084 383 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 GCSHP23434 173 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 SLC6A4P31645 630 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 PTGS2P35354 604 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 PGS1Q32NB8 556 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 ZFPM1Q8IX07 1006 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 NLGN4YQ8NFZ3 816 aaPredicted RBP6.74□□□□□ -1.33
CALD1-219ENST00000480638 OR56A1Q8NGH5 318 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 JDP2Q8WYK2 163 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 RGMAQ96B86 450 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 VRK1Q99986 396 aaPredicted RBP6.74□□□□□ -1.33
CALD1-219ENST00000480638 SLC12A5Q9H2X9 1139 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 GSTO2Q9H4Y5 243 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 NRDE2Q9H7Z3 1164 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 MMRN2Q9H8L6 949 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 KLHL11Q9NVR0 708 aa6.74□□□□□ -1.33
CALD1-219ENST00000480638 ATP11BQ9Y2G3 1177 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms