RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
ABCF3-213ENST00000480539 LDHAP00338 332 aaKnown RBP16.45■□□□□ 0.22
ABCF3-213ENST00000480539 GUCY2FP51841 1108 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 PLCB3Q01970 1234 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 HSP90AA2PQ14568 343 aaPredicted RBP16.45■□□□□ 0.22
ABCF3-213ENST00000480539 PTPROQ16827 1216 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 GOLGA5Q8TBA6 731 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
ABCF3-213ENST00000480539 VN1R3Q9BXE9 311 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 SLC38A7Q9NVC3 462 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 CGNQ9P2M7 1197 aaKnown RBP16.45■□□□□ 0.22
ABCF3-213ENST00000480539 ANK1P16157 1881 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 TRANK1O15050 2925 aa16.45■□□□□ 0.22
ABCF3-213ENST00000480539 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 CARNS1A5YM72 827 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 PDXKO00764 312 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 KIAA0391O15091 583 aaKnown RBP16.44■□□□□ 0.22
ABCF3-213ENST00000480539 ALDH2P05091 517 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 ADRB2P07550 413 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 IRS1P35568 1242 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 PRCPP42785 496 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 CLCNKBP51801 687 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 KRT17Q04695 432 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 CAMK1Q14012 370 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 TMEM132DQ14C87 1099 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 PLPP4Q5VZY2 271 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 EFCAB13Q8IY85 973 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 LMAN2LQ9H0V9 348 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 ENTPD7Q9NQZ7 604 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
ABCF3-213ENST00000480539 PODXLO00592 558 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 IL18RAPO95256 599 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 NR3C1P04150 777 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 BMP6P22004 513 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 IGFBP6P24592 240 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 MCM4P33991 863 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 CA8P35219 290 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 UBE3AQ05086 875 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 MORC3Q14149 939 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 CCDC85BQ15834 202 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 SNRNP35Q16560 246 aaKnown RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 TIGD5Q53EQ6 642 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 C3orf58Q8NDZ4 430 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 PPM1EQ8WY54 764 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 UROC1Q96N76 676 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 TCF25Q9BQ70 676 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 ADAM28Q9UKQ2 775 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
ABCF3-213ENST00000480539 LZTS1Q9Y250 596 aa16.43■□□□□ 0.22
ABCF3-213ENST00000480539 ZNF233A6NK53 670 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 EXOC3O60645 756 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 MBD3O95983 291 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
ABCF3-213ENST00000480539 NR2F2P24468 414 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 ERVFC1P60507 584 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 ZCWPW2Q504Y3 356 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 COBLL1Q53SF7 1204 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 FUT10Q6P4F1 479 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 DDX53Q86TM3 631 aaKnown RBP16.42■□□□□ 0.22
ABCF3-213ENST00000480539 CD302Q8IX05 232 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 MAFAQ8NHW3 353 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-213ENST00000480539 AUTS2Q8WXX7 1259 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 ZBP1Q9H171 429 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 ASB7Q9H672 318 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
ABCF3-213ENST00000480539 TRAF3IP3Q9Y228 551 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 STXBP5LQ9Y2K9 1186 aa16.42■□□□□ 0.22
ABCF3-213ENST00000480539 TRIM49BA6NDI0 452 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 PPEF2O14830 753 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 FSCN2O14926 492 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 XPOTO43592 962 aaKnown RBP16.41■□□□□ 0.22
ABCF3-213ENST00000480539 TADA2AO75478 443 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 B3GAT3O94766 335 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 CASP4P49662 377 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 TFAMQ00059 246 aaKnown RBP16.41■□□□□ 0.22
ABCF3-213ENST00000480539 CYP24A1Q07973 514 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 STIM1Q13586 685 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 UPP1Q16831 310 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 KLHL10Q6JEL2 608 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 TMC7Q7Z402 723 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 ADGRD2Q7Z7M1 963 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 B3GALT6Q96L58 329 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
ABCF3-213ENST00000480539 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms