RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CDCA2Q69YH5 1023 aaPredicted RBP17.78■□□□□ 0.44
DDX56-210ENST00000479440 MAMSTRQ6ZN01 415 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 PRR23BQ6ZRT6 265 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 PIK3AP1Q6ZUJ8 805 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 ANKS3Q6ZW76 656 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 PLA2G2FQ9BZM2 168 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 ZFP14Q9HCL3 533 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 SNTG2Q9NY99 539 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 BACE2Q9Y5Z0 518 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 EPG5Q9HCE0 2579 aa17.78■□□□□ 0.44
DDX56-210ENST00000479440 WDR87Q6ZQQ6 2873 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 ZNF197O14709 1029 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 TRAPPC3O43617 180 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 CDKL5O76039 1030 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 RBM25P49756 843 aaKnown RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 TOB2Q14106 344 aaPredicted RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 FAM187BQ17R55 369 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 TANGO2Q6ICL3 276 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 IRF7Q92985 503 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 UROC1Q96N76 676 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 C2orf40Q9H1Z8 148 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 PDZD7Q9H5P4 517 aa17.77■□□□□ 0.44
DDX56-210ENST00000479440 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.44
DDX56-210ENST00000479440 B3GAT3O94766 335 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 PTPN2P17706 415 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 FCARP24071 287 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 ELF1P32519 619 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 GRM2Q14416 872 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 NAB2Q15742 525 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 PRR23CQ6ZRP0 262 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 RUFY3Q7L099 469 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 FAM3CQ92520 227 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 DDX27Q96GQ7 796 aaKnown RBP17.76■□□□□ 0.43
DDX56-210ENST00000479440 TRMT61BQ9BVS5 477 aaKnown RBP17.76■□□□□ 0.43
DDX56-210ENST00000479440 FZD8Q9H461 694 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 SEMA4GQ9NTN9 838 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 VWA8A3KMH1 1905 aa17.76■□□□□ 0.43
DDX56-210ENST00000479440 ARHGEF37A1IGU5 675 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 SHISA7A6NL88 538 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 PRRG1O14668 218 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 PRPF4BQ13523 1007 aaKnown RBP17.75■□□□□ 0.43
DDX56-210ENST00000479440 CSRP2Q16527 193 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 MAPK6Q16659 721 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 DCAF4L1Q3SXM0 396 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 PDZD4Q76G19 769 aaPredicted RBP17.75■□□□□ 0.43
DDX56-210ENST00000479440 ZNF687Q8N1G0 1237 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 DEPDC1BQ8WUY9 529 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 MSANTD3Q96H12 275 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 TRPV5Q9NQA5 729 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 PCDHA12Q9UN75 941 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 PIAS3Q9Y6X2 628 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 COL4A2P08572 1712 aa17.75■□□□□ 0.43
DDX56-210ENST00000479440 STK36Q9NRP7 1315 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 MICAL2O94851 1124 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 PRKCBP05771 671 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 KCNA4P22459 653 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 TKTP29401 623 aaKnown RBP17.74■□□□□ 0.43
DDX56-210ENST00000479440 CNR2P34972 360 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 ROR1Q01973 937 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 STK3Q13188 491 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 SIM2Q14190 667 aaPredicted RBP17.74■□□□□ 0.43
DDX56-210ENST00000479440 CALCRLQ16602 461 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 PRSS36Q5K4E3 855 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 ELMOD1Q8N336 334 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 CORO1BQ9BR76 489 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 LMAN1LQ9HAT1 526 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 GPRC5CQ9NQ84 441 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
DDX56-210ENST00000479440 ACACBO00763 2458 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 NOTCH4Q99466 2003 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 REC8O95072 547 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 XRCC6P12956 609 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX56-210ENST00000479440 PSMC3P17980 439 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 CXCL12P48061 93 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 CLCNKBP51801 687 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 DMWDQ09019 674 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 LRRC32Q14392 662 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 FAM78AQ5JUQ0 283 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 SLC8B1Q6J4K2 584 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 C1orf228Q6PIY5 440 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
DDX56-210ENST00000479440 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 ZNF461Q8TAF7 563 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 PIGOQ8TEQ8 1089 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 ASB16Q96NS5 453 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 BRMS1Q9HCU9 246 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 ZNF334Q9HCZ1 680 aaPredicted RBP17.73■□□□□ 0.43
DDX56-210ENST00000479440 GDAQ9Y2T3 454 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 CYP46A1Q9Y6A2 500 aa17.73■□□□□ 0.43
DDX56-210ENST00000479440 GDI1P31150 447 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 SATB1Q01826 763 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 UPP1Q16831 310 aa17.72■□□□□ 0.43
DDX56-210ENST00000479440 GLRA4Q5JXX5 417 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms