RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KIF4AO95239 1232 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CYP2J2P51589 502 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CLCNKBP51801 687 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ERVFC1P60507 584 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 PLCB3Q01970 1234 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SOX4Q06945 474 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 PSMD2Q13200 908 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CAMK1Q14012 370 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 HSP90AA2PQ14568 343 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 NAB2Q15742 525 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 KYAT1Q16773 422 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TCEAL5Q5H9L2 206 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ALKAL1Q6UXT8 129 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 EP400NLQ6ZTU2 488 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 RBM23Q86U06 439 aaKnown RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 VPS52Q8N1B4 723 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ZNF507Q8TCN5 953 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 UBE2Q2Q8WVN8 375 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 AUTS2Q8WXX7 1259 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 VN1R3Q9BXE9 311 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 LMAN2LQ9H0V9 348 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 LMCD1Q9NZU5 365 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TUBGCP4Q9UGJ1 667 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CPSF3Q9UKF6 684 aaKnown RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 STYXL1Q9Y6J8 313 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TRIOO75962 3097 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TTC28Q96AY4 2481 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TTC26A0AVF1 554 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CARNS1A5YM72 827 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 C2CD2LO14523 706 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SMC2O95347 1197 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SLC34A2O95436 690 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 NFICP08651 508 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 KCNE1P15382 129 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 POU3F3P20264 500 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 GARTP22102 1010 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 GTF2F1P35269 517 aaKnown RBP eCLIP7.5□□□□□ -1.214e-8■■■□□ 16.5
BRCA1-215ENST00000478531 GUCY2FP51841 1108 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 UBE3AQ05086 875 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 CAMK4Q16566 473 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 KNOP1Q1ED39 458 aaKnown RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 BMT2Q1RMZ1 405 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 JADE1Q6IE81 842 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 HS2ST1Q7LGA3 356 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ADGRD2Q7Z7M1 963 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 DDX53Q86TM3 631 aaKnown RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SMARCE1Q969G3 411 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 B3GALT6Q96L58 329 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 TIGD1Q96MW7 591 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 COLEC11Q9BWP8 271 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 IGFLR1Q9H665 355 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 PRDM6Q9NQX0 595 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 AGPAT3Q9NRZ7 376 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 SLC38A7Q9NVC3 462 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 RBAKQ9NYW8 714 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-215ENST00000478531 HSPBP1Q9NZL4 362 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 ADAM28Q9UKQ2 775 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
BRCA1-215ENST00000478531 NCOR1O75376 2440 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PLXNA3P51805 1871 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 HIDE1A8MVS5 230 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PODXLO00592 558 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PER2O15055 1255 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 TGFB1I1O43294 461 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 EXTL3O43909 919 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 TADA2AO75478 443 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 B3GAT3O94766 335 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 NRIP1P48552 1158 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 SMC1AQ14683 1233 aaKnown RBP7.49□□□□□ -1.21
BRCA1-215ENST00000478531 KCNB1Q14721 858 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 TMEM132DQ14C87 1099 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 XKR4Q5GH76 650 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 ISM2Q6H9L7 571 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 FUT10Q6P4F1 479 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 CRELD2Q6UXH1 353 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-215ENST00000478531 GPD1LQ8N335 351 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 RDH13Q8NBN7 331 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PPP2R3CQ969Q6 453 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 FAM84AQ96KN4 292 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 ZBP1Q9H171 429 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PLEKHA5Q9HAU0 1116 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 RMND1Q9NWS8 449 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 PCDHA5Q9Y5H7 936 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 TSC2P49815 1807 aa7.49□□□□□ -1.21
BRCA1-215ENST00000478531 SF3B1O75533 1304 aaKnown RBP eCLIP7.49□□□□□ -1.211e-9■■■■■ 99.9
BRCA1-215ENST00000478531 GOLGA6L22H0YM25 854 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 I3L4J1 428 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 BIN1O00499 593 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 FSCN2O14926 492 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 IL18RAPO95256 599 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 LDHAP00338 332 aaKnown RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 SOD2P04179 222 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 URODP06132 367 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 IGFBP6P24592 240 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-215ENST00000478531 WNT7BP56706 349 aa7.48□□□□□ -1.21
BRCA1-215ENST00000478531 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms