RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-222ENST00000478095 CCDC34Q96HJ3 373 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 IGSF21Q96ID5 467 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 PPP1R10Q96QC0 940 aaKnown RBP11.19□□□□□ -0.62
HDAC6-222ENST00000478095 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 RPF1Q9H9Y2 349 aaKnown RBP11.19□□□□□ -0.62
HDAC6-222ENST00000478095 TLR9Q9NR96 1032 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
HDAC6-222ENST00000478095 CPSF3Q9UKF6 684 aaKnown RBP11.19□□□□□ -0.62
HDAC6-222ENST00000478095 STYXL1Q9Y6J8 313 aa11.19□□□□□ -0.62
HDAC6-222ENST00000478095 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-222ENST00000478095 UBE4BO95155 1302 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 CLIC2O15247 247 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 UBE3AQ05086 875 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 PPP2R3AQ06190 1150 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 SOX4Q06945 474 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-222ENST00000478095 TIGD5Q53EQ6 642 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 TCEAL5Q5H9L2 206 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 PLPP4Q5VZY2 271 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 ADGRD2Q7Z7M1 963 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 AUTS2Q8WXX7 1259 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
HDAC6-222ENST00000478095 TCF25Q9BQ70 676 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 VN1R3Q9BXE9 311 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 PRDM6Q9NQX0 595 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 ENTPD7Q9NQZ7 604 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 AGPAT3Q9NRZ7 376 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 LMCD1Q9NZU5 365 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 TUBGCP4Q9UGJ1 667 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
HDAC6-222ENST00000478095 TTC26A0AVF1 554 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 LACTBL1A8MY62 500 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 TGFB1I1O43294 461 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 KIF4AO95239 1232 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 KCNE1P15382 129 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 GARTP22102 1010 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 IGFBP6P24592 240 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 CYP2J2P51589 502 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 CLCNKBP51801 687 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 GUCY2FP51841 1108 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 WNT7BP56706 349 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 PSMD2Q13200 908 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 KYAT1Q16773 422 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 KNOP1Q1ED39 458 aaKnown RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 BMT2Q1RMZ1 405 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 JADE1Q6IE81 842 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 CLEC17AQ6ZS10 378 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 TAS1R1Q7RTX1 841 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 RBM23Q86U06 439 aaKnown RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 SMYD4Q8IYR2 804 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 B3GALT6Q96L58 329 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 GBP4Q96PP9 640 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 PCDHA5Q9Y5H7 936 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 EYSQ5T1H1 3165 aa11.17□□□□□ -0.62
HDAC6-222ENST00000478095 FNDC1Q4ZHG4 1894 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-222ENST00000478095 CARNS1A5YM72 827 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 HIDE1A8MVS5 230 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 C2CD2LO14523 706 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 FSCN2O14926 492 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 PER2O15055 1255 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 TADA2AO75478 443 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 B3GAT3O94766 335 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 SMC2O95347 1197 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 NFICP08651 508 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-222ENST00000478095 GTF2F1P35269 517 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDAC6-222ENST00000478095 NRIP1P48552 1158 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 KCNB1Q14721 858 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 ISM2Q6H9L7 571 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 HS2ST1Q7LGA3 356 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 DDX53Q86TM3 631 aaKnown RBP11.16□□□□□ -0.62
HDAC6-222ENST00000478095 CBWD2Q8IUF1 395 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 SMARCE1Q969G3 411 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 FAM84AQ96KN4 292 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 ZBP1Q9H171 429 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 IGFLR1Q9H665 355 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 SLC38A7Q9NVC3 462 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 RBAKQ9NYW8 714 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-222ENST00000478095 HSPBP1Q9NZL4 362 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
HDAC6-222ENST00000478095 ADAM28Q9UKQ2 775 aa11.16□□□□□ -0.62
HDAC6-222ENST00000478095 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-222ENST00000478095 I3L4J1 428 aa11.15□□□□□ -0.62
HDAC6-222ENST00000478095 PODXLO00592 558 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms