RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 RIT2Q99578 217 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 APOL6Q9BWW8 343 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 CSRNP2Q9H175 543 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 GLT8D2Q9H1C3 349 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 TMEM9BQ9NQ34 198 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 NCANO14594 1321 aa8.18□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC38A8A6NNN8 435 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 HEPACAM2A8MVW5 462 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 SPECC1L-ADORA2AF8WAN1 911 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 SH2B2O14492 632 aaPredicted RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 ZNF197O14709 1029 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CHADO15335 359 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 MSH4O15457 936 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 TSPAN1O60635 241 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 KIF4AO95239 1232 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 AKAP5P24588 427 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 AXLP30530 894 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CTHP32929 405 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 LIFRP42702 1097 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 JAK3P52333 1124 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 FGD1P98174 961 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CREB5Q02930 508 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 FUT2Q10981 343 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 TUSC3Q13454 348 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 NFXL1Q6ZNB6 911 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 RALGPS2Q86X27 583 aaPredicted RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 RAB11FIP4Q86YS3 637 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 PLEKHM2Q8IWE5 1019 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CSGALNACT1Q8TDX6 532 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 HASPINQ8TF76 798 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 RSPRY1Q96DX4 576 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CCDC51Q96ER9 411 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 JPH2Q9BR39 696 aaPredicted RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CORO1BQ9BR76 489 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 LNPKQ9C0E8 428 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 UNC45AQ9H3U1 944 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 NXF3Q9H4D5 531 aaKnown RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 MTRRQ9UBK8 725 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 V9GY48 417 aaPredicted RBP8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 NOTCH4Q99466 2003 aa8.17□□□□□ -1.1
SPTLC1-205ENST00000477888 CCDC69A6NI79 296 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 EIF4E1BA6NMX2 242 aaKnown RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 DDX11L8A8MPP1 907 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 hCG_1984214I3L0E3 225 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 KHNYNO15037 678 aaKnown RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 DCLK1O15075 740 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 MEFVO15553 781 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 CHMP2AO43633 222 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 PRC1O43663 620 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 PSMD10O75832 226 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 RHOBTB1O94844 696 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ABLIM3O94929 683 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 FGFR3P22607 806 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 IGFBP6P24592 240 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 KPNA1P52294 538 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 IRX4P78413 519 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 FCHO2Q0JRZ9 810 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 LAMTOR4Q0VGL1 99 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 SCAPQ12770 1279 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ELAVL2Q12926 359 aaKnown RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 PON2Q15165 354 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 GREB1Q4ZG55 1949 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 NOTUMQ6P988 496 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 CAMKK1Q8N5S9 505 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ZNF713Q8N859 430 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 RDM1Q8NG50 284 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ZNF461Q8TAF7 563 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ZSCAN18Q8TBC5 510 aaPredicted RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 HNRNPLLQ8WVV9 542 aaKnown RBP8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC5A5Q92911 643 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 GJA10Q969M2 543 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 TMEM143Q96AN5 459 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 CPB2Q96IY4 423 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 GTSE1Q9NYZ3 720 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 KLK14Q9P0G3 267 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 UNC79Q9P2D8 2635 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 BACE2Q9Y5Z0 518 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 CDY1Q9Y6F8 540 aa8.16□□□□□ -1.1
SPTLC1-205ENST00000477888 ASXL3Q9C0F0 2248 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 RALGAPA1Q6GYQ0 2036 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 MTCL1Q9Y4B5 1905 aaKnown RBP8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 ZMYM2Q9UBW7 1377 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 SPAARA0A1B0GVQ0 90 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 CASTOR2A6NHX0 329 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 PATE3B3GLJ2 98 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 H0Y626 953 aa8.15□□□□□ -1.1
SPTLC1-205ENST00000477888 GAS7O60861 476 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms