RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 GRM6O15303 877 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 SLC16A6O15403 523 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 ZNF20P17024 532 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 MALP21145 153 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 ACRV1P26436 265 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 ADAM17P78536 824 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 VPS72Q15906 364 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 CSRP2Q16527 193 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 SPATS1Q496A3 300 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 SLC4A10Q6U841 1118 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 UBE3BQ7Z3V4 1068 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 DENND1CQ8IV53 801 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 C3orf20Q8ND61 904 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 RUNDC1Q96C34 613 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 C1GALT1C1Q96EU7 318 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 PHACTR3Q96KR7 559 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 DMRTA2Q96SC8 542 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 MNTQ99583 582 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 CGRRF1Q99675 332 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 ACO2Q99798 780 aaKnown RBP4.28□□□□□ -1.72
TARDBP-208ENST00000477447 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 MAN1C1Q9NR34 630 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 LMBRD1Q9NUN5 540 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 CALCOCO1Q9P1Z2 691 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 FEZ2Q9UHY8 353 aaPredicted RBP4.28□□□□□ -1.72
TARDBP-208ENST00000477447 CLCA2Q9UQC9 943 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 POLHQ9Y253 713 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 PCDHA3Q9Y5H8 950 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 NR2E3Q9Y5X4 410 aa4.28□□□□□ -1.72
TARDBP-208ENST00000477447 PNPLA7Q6ZV29 1317 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 GOLGA6CA6NDK9 693 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 GOLGA6BA6NDN3 693 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 ERC2O15083 957 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 POMCP01189 267 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 ALDH2P05091 517 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 SBK3P0C264 359 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 GOLGA6DP0CG33 693 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 ALAS1P13196 640 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 MGAT1P26572 445 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 SMARCA1P28370 1054 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 HK3P52790 923 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 SNAPC2Q13487 334 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 RRP1BQ14684 758 aaKnown RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 R3HDM1Q15032 1099 aaKnown RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 GFOD2Q3B7J2 385 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 PABPC1LQ4VXU2 614 aaKnown RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 ARHGAP29Q52LW3 1261 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 HSP90AB2PQ58FF8 381 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 METTL24Q5JXM2 366 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 SPDYAQ5MJ70 313 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 HEATR3Q7Z4Q2 680 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 PRRT2Q7Z6L0 340 aaPredicted RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 SH2D3CQ8N5H7 860 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 TTC8Q8TAM2 541 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 CDK5RAP1Q96SZ6 601 aaKnown RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 PACSIN1Q9BY11 444 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 FBXO34Q9NWN3 711 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 GOLGA6AQ9NYA3 693 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 ABCF2Q9UG63 623 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 EIF2B4Q9UI10 523 aaKnown RBP4.27□□□□□ -1.73
TARDBP-208ENST00000477447 STXBP5LQ9Y2K9 1186 aa4.27□□□□□ -1.73
TARDBP-208ENST00000477447 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 CDHR4A6H8M9 788 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 H3BML4 177 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 LEFTY2O00292 366 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 CTNND1O60716 968 aaKnown RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 UBXN7O94888 489 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 HAUS5O94927 633 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 ARIH2O95376 493 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 AMHP03971 560 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 ITGB1P05556 798 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 MTHFD1P11586 935 aaKnown RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 SLC6A2P23975 617 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 HTR1BP28222 390 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 APOBEC3AP31941 199 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 IL12RB1P42701 662 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 CHN2P52757 468 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 CDSNQ15517 529 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 FLYWCH1Q4VC44 716 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 USP39Q53GS9 565 aaKnown RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 DACT2Q5SW24 774 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 NAIF1Q69YI7 327 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 DRICH1Q6PGQ1 229 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 HTR3DQ70Z44 454 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 SYT12Q8IV01 421 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 CDK5RAP3Q96JB5 506 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 FAM193BQ96PV7 902 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 NDC1Q9BTX1 674 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 SLAMF7Q9NQ25 335 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 DDX20Q9UHI6 824 aaKnown RBP4.26□□□□□ -1.73
TARDBP-208ENST00000477447 SORCS3Q9UPU3 1222 aa4.26□□□□□ -1.73
TARDBP-208ENST00000477447 B8ZZF3 427 aa4.25□□□□□ -1.73
TARDBP-208ENST00000477447 NT5C1B-RDH14C9J2C7 533 aa4.25□□□□□ -1.73
TARDBP-208ENST00000477447 H3BUI4 141 aa4.25□□□□□ -1.73
TARDBP-208ENST00000477447 F2RL2O00254 374 aa4.25□□□□□ -1.73
TARDBP-208ENST00000477447 B3GALT2O43825 422 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms