RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 LRFN3Q9BTN0 628 aa16.46■□□□□ 0.23
SNX13-207ENST00000475800 KIAA1586Q9HCI6 787 aa16.46■□□□□ 0.23
SNX13-207ENST00000475800 CPSF3Q9UKF6 684 aaKnown RBP16.46■□□□□ 0.23
SNX13-207ENST00000475800 PCDHA5Q9Y5H7 936 aa16.46■□□□□ 0.23
SNX13-207ENST00000475800 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 TTC26A0AVF1 554 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 TISP43B9A030 160 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 XPOTO43592 962 aaKnown RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 ADRB2P07550 413 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 CXCL8P10145 99 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 HOXD13P35453 343 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 SLC11A1P49279 550 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 SLC10A6Q3KNW5 377 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 PDE12Q6L8Q7 609 aaKnown RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 C12orf56Q8IXR9 622 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 GUF1Q8N442 669 aaKnown RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 SPPL3Q8TCT6 385 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 UROC1Q96N76 676 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
SNX13-207ENST00000475800 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 ASB7Q9H672 318 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 CLDND1Q9NY35 253 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
SNX13-207ENST00000475800 PDXKO00764 312 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 EXTL3O43909 919 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 IL18RAPO95256 599 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 TNFSF9P41273 254 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 OR1G1P47890 313 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 ACOT2P49753 483 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 ENOX2Q16206 610 aaKnown RBP16.44■□□□□ 0.22
SNX13-207ENST00000475800 LEXMQ3ZCV2 418 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 SEZ6Q53EL9 994 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 TMEM31Q5JXX7 168 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
SNX13-207ENST00000475800 GPD1LQ8N335 351 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 DDX27Q96GQ7 796 aaKnown RBP16.44■□□□□ 0.22
SNX13-207ENST00000475800 CBWD1Q9BRT8 395 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 IGFLR1Q9H665 355 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
SNX13-207ENST00000475800 AGPAT3Q9NRZ7 376 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 DERAQ9Y315 318 aa16.44■□□□□ 0.22
SNX13-207ENST00000475800 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 NRP1O14786 923 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 GRM6O15303 877 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 TGFB1I1O43294 461 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 B4GALT3O60512 393 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 PBX3P40426 434 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 PPP1R2P41236 205 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 NAB2Q15742 525 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 GLRA4Q5JXX5 417 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 DDX53Q86TM3 631 aaKnown RBP16.43■□□□□ 0.22
SNX13-207ENST00000475800 NT5DC4Q86YG4 428 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 GJD3Q8N144 294 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 TMEM174Q8WUU8 243 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 PPP2R3CQ969Q6 453 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 IKZF4Q9H2S9 585 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 NSUN3Q9H649 340 aaKnown RBP16.43■□□□□ 0.22
SNX13-207ENST00000475800 TLR9Q9NR96 1032 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 HSPBP1Q9NZL4 362 aa16.43■□□□□ 0.22
SNX13-207ENST00000475800 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
SNX13-207ENST00000475800 ZNF233A6NK53 670 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 LACTBL1A8MY62 500 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 NT5C1B-RDH14C9J2C7 533 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 CALUO43852 315 aaPredicted RBP16.42■□□□□ 0.22
SNX13-207ENST00000475800 CYP3A5P20815 502 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 RPL9P32969 192 aaKnown RBP16.42■□□□□ 0.22
SNX13-207ENST00000475800 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNX13-207ENST00000475800 STIM1Q13586 685 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 SURF1Q15526 300 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 ZBTB41Q5SVQ8 909 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 CRELD2Q6UXH1 353 aaPredicted RBP16.42■□□□□ 0.22
SNX13-207ENST00000475800 SLC9A9Q8IVB4 645 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 BRSK2Q8IWQ3 736 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 XXYLT1Q8NBI6 393 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 FAM122AQ96E09 287 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 SAAL1Q96ER3 474 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 KIF12Q96FN5 646 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 FBXL18Q96ME1 805 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 PCIF1Q9H4Z3 704 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 PRG3Q9Y2Y8 225 aaPredicted RBP16.42■□□□□ 0.22
SNX13-207ENST00000475800 C2CD2Q9Y426 696 aa16.42■□□□□ 0.22
SNX13-207ENST00000475800 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 CASTOR2A6NHX0 329 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
SNX13-207ENST00000475800 DCLRE1AQ6PJP8 1040 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 TRIML1Q8N9V2 468 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
SNX13-207ENST00000475800 ZMAT2Q96NC0 199 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms