RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TMEM189-UBE2V1I3L0A0 370 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 POU2F2P09086 479 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 TKTP29401 623 aaKnown RBP17.18■□□□□ 0.34
SRRT-209ENST00000474896 EFNA5P52803 228 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 PRKCQQ04759 706 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 UBXN2BQ14CS0 331 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 ECM1Q16610 540 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 ATF7IP2Q5U623 682 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 ING5Q8WYH8 240 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 RMDN1Q96DB5 314 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
SRRT-209ENST00000474896 BCO2Q9BYV7 579 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 SPATA6Q9NWH7 488 aaPredicted RBP17.18■□□□□ 0.34
SRRT-209ENST00000474896 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 MRPS23Q9Y3D9 190 aaKnown RBP17.18■□□□□ 0.34
SRRT-209ENST00000474896 TRIP11Q15643 1979 aa17.18■□□□□ 0.34
SRRT-209ENST00000474896 I3L4J1 428 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 K7ERI5 159 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 TRAPPC3O43617 180 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 CD72P21854 359 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 BRCC3P46736 316 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 PFKPQ01813 784 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 UPP1Q16831 310 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 RTL10Q7L3V2 364 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 NPAS3Q8IXF0 933 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 DCLK2Q8N568 766 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 RUBCNQ92622 972 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 MCRS1Q96EZ8 462 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 UROC1Q96N76 676 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 BHMT2Q9H2M3 363 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 GOLGA2P5Q9HBQ8 144 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 BACE2Q9Y5Z0 518 aa17.17■□□□□ 0.34
SRRT-209ENST00000474896 DCHS1Q96JQ0 3298 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 FANCMQ8IYD8 2048 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 ZNF292O60281 2723 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 MIA3Q5JRA6 1907 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 SMIM28A0A1B0GU29 152 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 LAMTOR5O43504 91 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 RHOP08100 348 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 MUTP22033 750 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 CCT6AP40227 531 aaKnown RBP17.16■□□□□ 0.34
SRRT-209ENST00000474896 ST3GAL1Q11201 340 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 ANKS3Q6ZW76 656 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 APBB1IPQ7Z5R6 666 aaPredicted RBP17.16■□□□□ 0.34
SRRT-209ENST00000474896 SUMF1Q8NBK3 374 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 KIFAP3Q92845 792 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
SRRT-209ENST00000474896 OSBPL6Q9BZF3 934 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 PLA2G2FQ9BZM2 168 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
SRRT-209ENST00000474896 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 TNFSF13BQ9Y275 285 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 COL4A3Q01955 1670 aa17.16■□□□□ 0.34
SRRT-209ENST00000474896 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
SRRT-209ENST00000474896 PTPN2P17706 415 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 YARSP54577 528 aaKnown RBP17.15■□□□□ 0.34
SRRT-209ENST00000474896 OSTNP61366 133 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 CSTF1Q05048 431 aaKnown RBP17.15■□□□□ 0.34
SRRT-209ENST00000474896 ZBTB41Q5SVQ8 909 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 HAUS3Q68CZ6 603 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 POTEHQ6S545 545 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 ZNF461Q8TAF7 563 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 C8orf76Q96K31 380 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 LTB4R2Q9NPC1 389 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 GDE1Q9NZC3 331 aa17.15■□□□□ 0.34
SRRT-209ENST00000474896 WDR87Q6ZQQ6 2873 aa17.14■□□□□ 0.34
SRRT-209ENST00000474896 CCDC169A6NNP5 214 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ECI2O75521 394 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ELF1P32519 619 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ARPP19P56211 112 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 SOX4Q06945 474 aaPredicted RBP17.14■□□□□ 0.33
SRRT-209ENST00000474896 ORC2Q13416 577 aaPredicted RBP17.14■□□□□ 0.33
SRRT-209ENST00000474896 SLC5A9Q2M3M2 681 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ZNF528Q3MIS6 628 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 TTC38Q5R3I4 469 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 TANGO2Q6ICL3 276 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 DGLUCYQ7Z3D6 616 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 C4orf32Q8N8J7 132 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 CEP120Q8N960 986 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
SRRT-209ENST00000474896 CCDC94Q9BW85 323 aaPredicted RBP17.14■□□□□ 0.33
SRRT-209ENST00000474896 FOXP1Q9H334 677 aaPredicted RBP17.14■□□□□ 0.33
SRRT-209ENST00000474896 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 FBXO4Q9UKT5 387 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 OTOGLQ3ZCN5 2332 aa17.14■□□□□ 0.33
SRRT-209ENST00000474896 ARHGEF37A1IGU5 675 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 PRRG1O14668 218 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 ABLIM3O94929 683 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
SRRT-209ENST00000474896 LRG1P02750 347 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 GRM5P41594 1212 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
SRRT-209ENST00000474896 PEX3P56589 373 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 ROR1Q01973 937 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
SRRT-209ENST00000474896 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
SRRT-209ENST00000474896 SLC8B1Q6J4K2 584 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms