RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 NACC1Q96RE7 527 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 KIFC3Q9BVG8 833 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 CCDC113Q9H0I3 377 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 GOLGA2P5Q9HBQ8 144 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 NCDNQ9UBB6 729 aa15.42■□□□□ 0.06
CCDC78-209ENST00000474647 DNMT3BQ9UBC3 853 aaKnown RBP15.42■□□□□ 0.06
CCDC78-209ENST00000474647 MRPS23Q9Y3D9 190 aaKnown RBP15.42■□□□□ 0.06
CCDC78-209ENST00000474647 FAM170BA6NMN3 283 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 JAK2O60674 1132 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 B3GAT3O94766 335 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 FGFR3P22607 806 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 TKTP29401 623 aaKnown RBP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 NAMPTP43490 491 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 CSTF1Q05048 431 aaKnown RBP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 RAB33AQ14088 237 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 PUM1Q14671 1186 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 DCAF4L1Q3SXM0 396 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 TPRG1Q6ZUI0 275 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 ERMNQ8TAM6 284 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 MCRS1Q96EZ8 462 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 DDX23Q9BUQ8 820 aaKnown RBP15.41■□□□□ 0.06
CCDC78-209ENST00000474647 POLD4Q9HCU8 107 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 LTB4R2Q9NPC1 389 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 MTRRQ9UBK8 725 aa15.41■□□□□ 0.06
CCDC78-209ENST00000474647 ACKR2O00590 384 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 GUCY1B3Q02153 619 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 PPP2R5AQ15172 486 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 UVSSAQ2YD98 709 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 ZNF528Q3MIS6 628 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 RSPO2Q6UXX9 243 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-209ENST00000474647 SUMF1Q8NBK3 374 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 DDX27Q96GQ7 796 aaKnown RBP15.4■□□□□ 0.06
CCDC78-209ENST00000474647 IFT74Q96LB3 600 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 POLR3CQ9BUI4 534 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-209ENST00000474647 FBXO4Q9UKT5 387 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 KCNH3Q9ULD8 1083 aa15.4■□□□□ 0.06
CCDC78-209ENST00000474647 TMEM189-UBE2V1I3L0A0 370 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 SPTLC1O15269 473 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 LRG1P02750 347 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 RHOP08100 348 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 POU2F2P09086 479 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 CEBPBP17676 345 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 CYP11B2P19099 503 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 BRCC3P46736 316 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 RBM25P49756 843 aaKnown RBP15.39■□□□□ 0.05
CCDC78-209ENST00000474647 RSPO4Q2I0M5 234 aaPredicted RBP15.39■□□□□ 0.05
CCDC78-209ENST00000474647 SLC5A9Q2M3M2 681 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 ATF7IP2Q5U623 682 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 ATRIPQ8WXE1 791 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 UROC1Q96N76 676 aa15.39■□□□□ 0.05
CCDC78-209ENST00000474647 PPP1R10Q96QC0 940 aaKnown RBP15.39■□□□□ 0.05
CCDC78-209ENST00000474647 TSC2P49815 1807 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 PRRG1O14668 218 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 OR52Z1P0C646 297 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 TARSP26639 723 aaKnown RBP15.38■□□□□ 0.05
CCDC78-209ENST00000474647 RPA1P27694 616 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 ELF1P32519 619 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 MAGEA9P43362 315 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 EFNA5P52803 228 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 ARPP19P56211 112 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 OSTNP61366 133 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 ROR1Q01973 937 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 SAFBQ15424 915 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC78-209ENST00000474647 UPP1Q16831 310 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 VARS2Q5ST30 1063 aaKnown RBP15.38■□□□□ 0.05
CCDC78-209ENST00000474647 TSSK4Q6SA08 328 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
CCDC78-209ENST00000474647 OSBPL6Q9BZF3 934 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 PLA2G2FQ9BZM2 168 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 HEBP1Q9NRV9 189 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 DENND4CQ5VZ89 1909 aa15.38■□□□□ 0.05
CCDC78-209ENST00000474647 NCAM2O15394 837 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 ECI2O75521 394 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 CCT6AP40227 531 aaKnown RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 YARSP54577 528 aaKnown RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 ANAPC15P60006 121 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 GRM2Q14416 872 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 ZNF174Q15697 407 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 HAUS3Q68CZ6 603 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 CEP120Q8N960 986 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 CORO1BQ9BR76 489 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 CCDC94Q9BW85 323 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 BHMT2Q9H2M3 363 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 TOPORSQ9NS56 1045 aaPredicted RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 NDRG2Q9UN36 371 aaKnown RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 SMG5Q9UPR3 1016 aaKnown RBP15.37■□□□□ 0.05
CCDC78-209ENST00000474647 PCDHGA2Q9Y5H1 932 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 BACE2Q9Y5Z0 518 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 GPR179Q6PRD1 2367 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 NCOR2Q9Y618 2525 aa15.37■□□□□ 0.05
CCDC78-209ENST00000474647 F5P12259 2224 aa15.36■□□□□ 0.05
CCDC78-209ENST00000474647 SPAG17Q6Q759 2223 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms