RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 CTSAP10619 480 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 CYP3A5P20815 502 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 CA8P35219 290 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 TNFSF9P41273 254 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 ERVFC1P60507 584 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 STK4Q13043 487 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 UPP1Q16831 310 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 PLPP4Q5VZY2 271 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 KIAA1841Q6NSI8 718 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 NT5DC4Q86YG4 428 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 NELFCDQ8IXH7 590 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 MRPL43Q8N983 215 aaKnown RBP15.44■□□□□ 0.06
BRCA1-211ENST00000472490 GLIS3Q8NEA6 775 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 SMARCE1Q969G3 411 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 FAM213AQ9BRX8 229 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 TLE6Q9H808 572 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 MRPL17Q9NRX2 175 aaKnown RBP15.44■□□□□ 0.06
BRCA1-211ENST00000472490 MARCH5Q9NX47 278 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 UBQLN1Q9UMX0 589 aaKnown RBP15.44■□□□□ 0.06
BRCA1-211ENST00000472490 IRAK3Q9Y616 596 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 LACTBL1A8MY62 500 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 GADD45BO75293 160 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 CXCL14O95715 111 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 URODP06132 367 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 SRGAP2BP0DMP2 458 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 IRS1P35568 1242 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 CLCNKBP51801 687 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 PNOCQ13519 176 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 AAK1Q2M2I8 961 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 GPR65Q8IYL9 337 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 KIAA0895Q8NCT3 520 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 BEST2Q8NFU1 509 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 BCL7CQ8WUZ0 217 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 HLA-CQ95604 372 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 CBWD1Q9BRT8 395 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 EMILIN2Q9BXX0 1053 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 ZBP1Q9H171 429 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 CXCL16Q9H2A7 254 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 IKZF4Q9H2S9 585 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 C2CD2Q9Y426 696 aa15.43■□□□□ 0.06
BRCA1-211ENST00000472490 COL4A4P53420 1690 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-211ENST00000472490 TGFB1I1O43294 461 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 PAX3P23760 479 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 HOXD13P35453 343 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 CREMQ03060 361 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 TMEM132DQ14C87 1099 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 ZBTB6Q15916 424 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 USP41Q3LFD5 358 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 CRELD2Q6UXH1 353 aaPredicted RBP15.42■□□□□ 0.06
BRCA1-211ENST00000472490 C12orf56Q8IXR9 622 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 NOC3LQ8WTT2 800 aaKnown RBP15.42■□□□□ 0.06
BRCA1-211ENST00000472490 PABPC5Q96DU9 382 aaKnown RBP15.42■□□□□ 0.06
BRCA1-211ENST00000472490 SAAL1Q96ER3 474 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 HERC2P3Q9BVR0 1158 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 PCIF1Q9H4Z3 704 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 HSPBP1Q9NZL4 362 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 NUB1Q9Y5A7 615 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 MYH11P35749 1972 aa15.42■□□□□ 0.06
BRCA1-211ENST00000472490 CHD9Q3L8U1 2897 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 C2orf71A6NGG8 1288 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 PODXLO00592 558 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 PDXKO00764 312 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 KIF4AO95239 1232 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 NRIP1P48552 1158 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 GLUD2P49448 558 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 SURF1Q15526 300 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 JADE1Q6IE81 842 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 RBM23Q86U06 439 aaKnown RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 PPFIBP1Q86W92 1011 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 BRSK2Q8IWQ3 736 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 RNF168Q8IYW5 571 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 GUF1Q8N442 669 aaKnown RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 SPATA20Q8TB22 786 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 CACTINQ8WUQ7 758 aaKnown RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 ATXN2LQ8WWM7 1075 aaKnown RBP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 RABGGTAQ92696 567 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 PAAF1Q9BRP4 392 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 IGFLR1Q9H665 355 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 GOLGA2P5Q9HBQ8 144 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRCA1-211ENST00000472490 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 PCDHA5Q9Y5H7 936 aa15.41■□□□□ 0.06
BRCA1-211ENST00000472490 NLRC5Q86WI3 1866 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 HIDE1A8MVS5 230 aa15.4■□□□□ 0.06
BRCA1-211ENST00000472490 TULP1O00294 542 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms