RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ADRB2P07550 413 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 GTF2H1P32780 548 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 BMP8BP34820 402 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 GRIK3Q13003 919 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 NCAPHQ15003 741 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 SHHQ15465 462 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
CCM2-205ENST00000472223 JADE1Q6IE81 842 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 ZFP42Q96MM3 310 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 TUBGCP2Q9BSJ2 902 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 MEIS3P2A8K0S8 358 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 TLL1O43897 1013 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 CLSTN1O94985 981 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 SCNN1GP51170 649 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 BIRC3Q13489 604 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 BTG3Q14201 252 aaPredicted RBP18.24■□□□□ 0.51
CCM2-205ENST00000472223 MAN2A1Q16706 1144 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 XKR4Q5GH76 650 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 CDKAL1Q5VV42 579 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 HERC6Q8IVU3 1022 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 LRRC43Q8N309 656 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 MMRN2Q9H8L6 949 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 CXXC1Q9P0U4 656 aaPredicted RBP18.24■□□□□ 0.51
CCM2-205ENST00000472223 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
CCM2-205ENST00000472223 TDRD15B5MCY1 1934 aaKnown RBP18.23■□□□□ 0.51
CCM2-205ENST00000472223 TRIP11Q15643 1979 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 GJB5O95377 273 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 AFPP02771 609 aaKnown RBP18.23■□□□□ 0.51
CCM2-205ENST00000472223 TPM3P06753 285 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 CYP3A5P20815 502 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 TRPC3Q13507 836 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 PAN2Q504Q3 1202 aaKnown RBP18.23■□□□□ 0.51
CCM2-205ENST00000472223 GLRA4Q5JXX5 417 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 CLLU1OSQ5K130 101 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 TRIM59Q8IWR1 403 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 CMTR2Q8IYT2 770 aaKnown RBP18.23■□□□□ 0.51
CCM2-205ENST00000472223 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 BORCS6Q96GS4 357 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 UROC1Q96N76 676 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 CASD1Q96PB1 797 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 RAD9AQ99638 391 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 AAASQ9NRG9 546 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 INTS13Q9NVM9 706 aa18.23■□□□□ 0.51
CCM2-205ENST00000472223 LRRIQ3A6PVS8 624 aaPredicted RBP18.22■□□□□ 0.51
CCM2-205ENST00000472223 INPPL1O15357 1258 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 NFICP08651 508 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 KRT19P08727 400 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 TRIM49P0CI25 452 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 TRIM49CP0CI26 452 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 PLCB2Q00722 1185 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 TUSC3Q13454 348 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 C9orf50Q5SZB4 431 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 KRT39Q6A163 491 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 IRF2BP1Q8IU81 584 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 CRIPAKQ8N1N5 446 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 DDX27Q96GQ7 796 aaKnown RBP18.22■□□□□ 0.51
CCM2-205ENST00000472223 POP1Q99575 1024 aaKnown RBP18.22■□□□□ 0.51
CCM2-205ENST00000472223 TMEM8AQ9HCN3 771 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 DPP3Q9NY33 737 aa18.22■□□□□ 0.51
CCM2-205ENST00000472223 LIMA1Q9UHB6 759 aaKnown RBP18.22■□□□□ 0.51
CCM2-205ENST00000472223 ANK1P16157 1881 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.21■□□□□ 0.51
CCM2-205ENST00000472223 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.21■□□□□ 0.51
CCM2-205ENST00000472223 ALDH2P05091 517 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 ZNF18P17022 549 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
CCM2-205ENST00000472223 MXI1P50539 228 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 DLG4P78352 724 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 CLDN10P78369 228 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 KCNH2Q12809 1159 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 KRT31Q15323 416 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 VWA3BQ502W6 1294 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 FIBCD1Q8N539 461 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 PPP1R10Q96QC0 940 aaKnown RBP18.21■□□□□ 0.51
CCM2-205ENST00000472223 IMPG2Q9BZV3 1241 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 RBSNQ9H1K0 784 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 VPS16Q9H269 839 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 TBC1D13Q9NVG8 400 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 ITGA11Q9UKX5 1188 aa18.21■□□□□ 0.51
CCM2-205ENST00000472223 CEP290O15078 2479 aa18.21■□□□□ 0.5
CCM2-205ENST00000472223 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 PTGESO14684 152 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 P4HA2O15460 535 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 CBFA2T2O43439 604 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 GCLMP48507 274 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 ALDH7A1P49419 539 aaKnown RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 RBP5P82980 135 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 UVSSAQ2YD98 709 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 LMBRD2Q68DH5 695 aaPredicted RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 TMCO2Q7Z6W1 182 aaPredicted RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 SLC35C1Q96A29 364 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 ZNF689Q96CS4 500 aaPredicted RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 ZMAT2Q96NC0 199 aaKnown RBP18.2■□□□□ 0.5
CCM2-205ENST00000472223 MTMR12Q9C0I1 747 aa18.2■□□□□ 0.5
CCM2-205ENST00000472223 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms