RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PRMT2P55345 433 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 MRPS6P82932 125 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 GFPT1Q06210 699 aaPredicted RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PTGISQ16647 500 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 TMEM132AQ24JP5 1023 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 JADE1Q6IE81 842 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 TRAPPC11Q7Z392 1133 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 RPAINQ86UA6 219 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PALB2Q86YC2 1186 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NME8Q8N427 588 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PCSK9Q8NBP7 692 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 ZMAT2Q96NC0 199 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SPAG5Q96R06 1193 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 TRPV6Q9H1D0 765 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 RNF39Q9H2S5 420 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NXF3Q9H4D5 531 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PAK6Q9NQU5 681 aaPredicted RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SIX4Q9UIU6 781 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NENFQ9UMX5 172 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NUB1Q9Y5A7 615 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 DUSP10Q9Y6W6 482 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SSU72P8A0A1W2PR75 194 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 MEIS3P2A8K0S8 358 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 NRDCO43847 1150 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SERPING1P05155 500 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 CLTAP09496 248 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 CCDC175P0C221 793 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SOX5P35711 763 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PRKCIP41743 596 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 GUCY2FP51841 1108 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 MYL6P60660 151 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 C1QTNF8P60827 252 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 CDC42EP1Q00587 391 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 TRAF7Q6Q0C0 670 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 WDR49Q8IV35 697 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 PPM1KQ8N3J5 372 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SLC43A3Q8NBI5 491 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 ARRDC4Q8NCT1 418 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 SHC3Q92529 594 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 WDR24Q96S15 920 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 XYLT2Q9H1B5 865 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 LZTFL1Q9NQ48 299 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 ZNHIT6Q9NWK9 470 aaKnown RBP8.99□□□□□ -0.97
GTF3A-206ENST00000470606 ADAMTS1Q9UHI8 967 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 MYO6Q9UM54 1294 aa8.99□□□□□ -0.97
GTF3A-206ENST00000470606 FAM170AA1A519 330 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 DDX3XO00571 662 aaKnown RBP eCLIP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 ACO1P21399 889 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 GRM5P41594 1212 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 MNX1P50219 401 aaPredicted RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 TFAMQ00059 246 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 KLHL30Q0D2K2 578 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 BIRC3Q13489 604 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 NCOA4Q13772 614 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 MBTPS1Q14703 1052 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 ASIC2Q16515 512 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 TSR1Q2NL82 804 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 TDRD12Q587J7 1177 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 SLC27A1Q6PCB7 646 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 ALKAL1Q6UXT8 129 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 FAM71AQ8IYT1 594 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 CCDC170Q8IYT3 715 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 SMG8Q8ND04 991 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 LNX1Q8TBB1 728 aaPredicted RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 VTI1AQ96AJ9 217 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 CCDC42Q96M95 316 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 NUCKS1Q9H1E3 243 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 RPF1Q9H9Y2 349 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 SNTG2Q9NY99 539 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 SALL4Q9UJQ4 1053 aa8.98□□□□□ -0.97
GTF3A-206ENST00000470606 PIN4Q9Y237 131 aaKnown RBP8.98□□□□□ -0.97
GTF3A-206ENST00000470606 MOXD2PA6NHM9 499 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 MGEA5O60502 916 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 OFD1O75665 1012 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 ASS1P00966 412 aaKnown RBP8.97□□□□□ -0.97
GTF3A-206ENST00000470606 TNNT1P13805 278 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 AKAP5P24588 427 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 THPOP40225 353 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 STAT1P42224 750 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 PIK3CAP42336 1068 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 AFF1P51825 1210 aaKnown RBP8.97□□□□□ -0.97
GTF3A-206ENST00000470606 CETN1Q12798 172 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 DUOXA2Q1HG44 320 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 SLC9C1Q4G0N8 1177 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 USP37Q86T82 979 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 SLC30A5Q8TAD4 765 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 NT5C1BQ96P26 610 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 DEFB118Q96PH6 123 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
GTF3A-206ENST00000470606 PACSIN1Q9BY11 444 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 ST3GAL5Q9UNP4 418 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 TRPV2Q9Y5S1 764 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 MROH7Q68CQ1 1323 aa8.97□□□□□ -0.97
GTF3A-206ENST00000470606 PPEF2O14830 753 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms