RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 RDH13Q8NBN7 331 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 ZSWIM2Q8NEG5 633 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 PARD3BQ8TEW8 1205 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 CLP1Q92989 425 aaKnown RBP17.7■□□□□ 0.42
HLA-C-205ENST00000466892 KIF12Q96FN5 646 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 DDX27Q96GQ7 796 aaKnown RBP17.7■□□□□ 0.42
HLA-C-205ENST00000466892 BORCS6Q96GS4 357 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 SAMD11Q96NU1 681 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 FAM193BQ96PV7 902 aaPredicted RBP17.7■□□□□ 0.42
HLA-C-205ENST00000466892 CGRRF1Q99675 332 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 STK39Q9UEW8 545 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 NFE2L3Q9Y4A8 694 aa17.7■□□□□ 0.42
HLA-C-205ENST00000466892 GTF2H1P32780 548 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 RPL9P32969 192 aaKnown RBP17.69■□□□□ 0.42
HLA-C-205ENST00000466892 VAMP7P51809 220 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 NAB2Q15742 525 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 CCDC40Q4G0X9 1142 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 TMCO2Q7Z6W1 182 aaPredicted RBP17.69■□□□□ 0.42
HLA-C-205ENST00000466892 BEST2Q8NFU1 509 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 FAM200AQ8TCP9 573 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 ZMAT2Q96NC0 199 aaKnown RBP17.69■□□□□ 0.42
HLA-C-205ENST00000466892 PDE11AQ9HCR9 933 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
HLA-C-205ENST00000466892 PDE4DIPQ5VU43 2346 aa17.69■□□□□ 0.42
HLA-C-205ENST00000466892 POMCP01189 267 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 EEF1GP26641 437 aaKnown RBP17.68■□□□□ 0.42
HLA-C-205ENST00000466892 LRPAP1P30533 357 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 PPM1AP35813 382 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 AFF1P51825 1210 aaKnown RBP17.68■□□□□ 0.42
HLA-C-205ENST00000466892 SPAG1Q07617 926 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 DUOXA2Q1HG44 320 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 JADE1Q6IE81 842 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 COLGALT2Q8IYK4 626 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 FAM212AQ96EL1 285 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 ANKRD36BP1Q96IX9 119 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 PLVAPQ9BX97 442 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 PBX4Q9BYU1 374 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 GZF1Q9H116 711 aaPredicted RBP17.68■□□□□ 0.42
HLA-C-205ENST00000466892 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 INTS13Q9NVM9 706 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 MAGEC2Q9UBF1 373 aaPredicted RBP17.68■□□□□ 0.42
HLA-C-205ENST00000466892 ITGA11Q9UKX5 1188 aa17.68■□□□□ 0.42
HLA-C-205ENST00000466892 CEP290O15078 2479 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 TMEM265A0A087WTH1 108 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 BECN2A8MW95 431 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 RBAK-RBAKDNI3L0D1 243 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 TNNC2P02585 160 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 NFICP08651 508 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 TMEM191BP0C7N4 346 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 DLATP10515 647 aaKnown RBP17.67■□□□□ 0.42
HLA-C-205ENST00000466892 TNNI1P19237 187 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 ALDH7A1P49419 539 aaKnown RBP17.67■□□□□ 0.42
HLA-C-205ENST00000466892 GATMP50440 423 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 GLRA4Q5JXX5 417 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 CDKAL1Q5VV42 579 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 FAM109BQ6ICB4 259 aaPredicted RBP17.67■□□□□ 0.42
HLA-C-205ENST00000466892 CCDC127Q96BQ5 260 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 CWH43Q9H720 699 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 MIOSQ9NXC5 875 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 PLAGL2Q9UPG8 496 aa17.67■□□□□ 0.42
HLA-C-205ENST00000466892 MRPL42Q9Y6G3 142 aaKnown RBP17.67■□□□□ 0.42
HLA-C-205ENST00000466892 LINC01553A4QN01 128 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 LRRIQ3A6PVS8 624 aaPredicted RBP17.66■□□□□ 0.42
HLA-C-205ENST00000466892 TMEM189-UBE2V1I3L0A0 370 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 PMM2O15305 246 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 ALDH2P05091 517 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 TPM4P67936 248 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 TFAMQ00059 246 aaKnown RBP17.66■□□□□ 0.42
HLA-C-205ENST00000466892 PAN2Q504Q3 1202 aaKnown RBP17.66■□□□□ 0.42
HLA-C-205ENST00000466892 IRF2BP1Q8IU81 584 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 TRIM59Q8IWR1 403 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 EFCAB13Q8IY85 973 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 SLC35C1Q96A29 364 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 EEF2KMTQ96G04 330 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 CNOT6LQ96LI5 555 aaKnown RBP17.66■□□□□ 0.42
HLA-C-205ENST00000466892 ZNF558Q96NG5 402 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 NRDE2Q9H7Z3 1164 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 PCDHB12Q9Y5F1 795 aa17.66■□□□□ 0.42
HLA-C-205ENST00000466892 GRXCR1A8MXD5 290 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 C5orf67F2Z3F1 127 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 N4BP1O75113 896 aaKnown RBP17.65■□□□□ 0.42
HLA-C-205ENST00000466892 ZC3H11AO75152 810 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-C-205ENST00000466892 DDHD2O94830 711 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 RB1P06400 928 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 CA3P07451 260 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 LINC00271P0C7V0 271 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 PNPLA4P41247 253 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 RABGGTBP53611 331 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 WNT7BP56706 349 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 NCAPHQ15003 741 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 IQCB1Q15051 598 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 UPP1Q16831 310 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 ZNF280BQ86YH2 543 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 DHX40Q8IX18 779 aaKnown RBP17.65■□□□□ 0.42
HLA-C-205ENST00000466892 AOPEPQ8N6M6 819 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 PLEKHO2Q8TD55 490 aa17.65■□□□□ 0.42
HLA-C-205ENST00000466892 TGS1Q96RS0 853 aaKnown RBP17.65■□□□□ 0.42
HLA-C-205ENST00000466892 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms