RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 ERLIN2O94905 339 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 STBD1O95210 358 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 KIF20AO95235 890 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 SLFN14P0C7P3 912 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 MAPTP10636 758 aaKnown RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 HOXB8P17481 243 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 RAB27AP51159 221 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 GPC3P51654 580 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 SLC12A3P55017 1021 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 LAMTOR4Q0VGL1 99 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 KARSQ15046 597 aaKnown RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ZNF528Q3MIS6 628 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 AXDND1Q5T1B0 1012 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 FAM102BQ5T8I3 360 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 PLA2G4FQ68DD2 849 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 CNNM4Q6P4Q7 775 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 RHPN2Q8IUC4 686 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ZBTB44Q8NCP5 570 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 FEZF2Q8TBJ5 459 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 NETO1Q8TDF5 533 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 TRAPPC12Q8WVT3 735 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 KCTD12Q96CX2 325 aaKnown RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 HVCN1Q96D96 273 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 EPSTI1Q96J88 318 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 EPC1Q9H2F5 836 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ADAM7Q9H2U9 754 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 PARVGQ9HBI0 331 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 C1orf112Q9NSG2 853 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 PRMT7Q9NVM4 692 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 WRAP73Q9P2S5 460 aaPredicted RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 USTQ9Y2C2 406 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 CDY2AQ9Y6F7 541 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.62□□□□□ -1.19
CLDN4-204ENST00000466411 COL4A3Q01955 1670 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ADAMTS20P59510 1910 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ASXL3Q9C0F0 2248 aa7.62□□□□□ -1.19
CLDN4-204ENST00000466411 ITPR1Q14643 2758 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 PP2D1A8MPX8 630 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 E9PMD0 336 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 ENPP3O14638 875 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 FAM13AO94988 1023 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 SSBP05455 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 DCNP07585 359 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 STAG3L1P0CL83 205 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 PLS3P13797 630 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 DARSP14868 501 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 ZSCAN20P17040 1043 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 ARL2P36404 184 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 SYKP43405 635 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 CLCN3P51790 818 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 ZNF131P52739 623 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 NPEPPSP55786 919 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 NLRP11P59045 1033 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 UBE2HP62256 183 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 FAM160A1Q05DH4 1040 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 MGAT3Q09327 533 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 STRN3Q13033 797 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 TDGQ13569 410 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 BTG3Q14201 252 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 MAPK6Q16659 721 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 KYAT1Q16773 422 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 FAM187BQ17R55 369 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 FBXO47Q5MNV8 452 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 CDCA2Q69YH5 1023 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 RINT1Q6NUQ1 792 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 BLOC1S3Q6QNY0 202 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 UNQ6494/PRO21346Q6UXR6 183 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 RUFY4Q6ZNE9 571 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 C1orf186Q6ZWK4 172 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 TRMT1LQ7Z2T5 733 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 GPBP1Q86WP2 473 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 CCDC65Q8IXS2 484 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 ELOA2Q8IYF1 753 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 LRRC71Q8N4P6 559 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 RNF149Q8NC42 400 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 CNNM3Q8NE01 707 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 DEPTORQ8TB45 409 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 PRPF31Q8WWY3 499 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 TIGD1Q96MW7 591 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 CLIC6Q96NY7 704 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 NTPCRQ9BSD7 190 aaKnown RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 POLR3FQ9H1D9 316 aaPredicted RBP7.61□□□□□ -1.19
CLDN4-204ENST00000466411 OLFML3Q9NRN5 406 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 KBTBD4Q9NVX7 518 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 RMND1Q9NWS8 449 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 WNT16Q9UBV4 365 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 TELO2Q9Y4R8 837 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 PCDHB3Q9Y5E6 796 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 AKAP13Q12802 2813 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 PATJQ8NI35 1801 aa7.61□□□□□ -1.19
CLDN4-204ENST00000466411 UBE4BO95155 1302 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 PVALEFA0A1B0GWK0 134 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 FSD2A1L4K1 749 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 DENND3A2RUS2 1198 aa7.6□□□□□ -1.19
CLDN4-204ENST00000466411 LRRIQ4A6NIV6 560 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms