RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 TTC26A0AVF1 554 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 C2CD2LO14523 706 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 LINC01565O15544 149 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 TADA2AO75478 443 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 RHOBTB3O94955 611 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 CXCL14O95715 111 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 MYL1P05976 194 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 NFICP08651 508 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 KCNE1P15382 129 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 UBE2HP62256 183 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 RBM10P98175 930 aaKnown RBP12.69□□□□□ -0.38
CUX1-207ENST00000465461 UBE3AQ05086 875 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 PSMD2Q13200 908 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
CUX1-207ENST00000465461 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 KANK3Q6NY19 840 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 CD300LGQ6UXG3 332 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 EP400NLQ6ZTU2 488 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
CUX1-207ENST00000465461 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 C3orf58Q8NDZ4 430 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 TIGD1Q96MW7 591 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 COLEC11Q9BWP8 271 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 AGPAT3Q9NRZ7 376 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 LZTS1Q9Y250 596 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
CUX1-207ENST00000465461 I3L4J1 428 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
CUX1-207ENST00000465461 GARTP22102 1010 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 BRCC3P46736 316 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 NRIP1P48552 1158 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 CYP2J2P51589 502 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 HYAL1Q12794 435 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 CAMK4Q16566 473 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 UPP1Q16831 310 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 KNOP1Q1ED39 458 aaKnown RBP12.68□□□□□ -0.38
CUX1-207ENST00000465461 BMT2Q1RMZ1 405 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 TIGD5Q53EQ6 642 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 FUT10Q6P4F1 479 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 CBWD2Q8IUF1 395 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
CUX1-207ENST00000465461 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 ADAM28Q9UKQ2 775 aa12.68□□□□□ -0.38
CUX1-207ENST00000465461 UBE4BO95155 1302 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 PODXLO00592 558 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 PPEF2O14830 753 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 EXTL3O43909 919 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 B3GAT3O94766 335 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 EFEMP2O95967 443 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 ADRB2P07550 413 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 TFF2Q03403 129 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 KCNB1Q14721 858 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 KYAT1Q16773 422 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 LMBRD2Q68DH5 695 aaPredicted RBP12.67□□□□□ -0.38
CUX1-207ENST00000465461 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 CEP57Q86XR8 500 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 GPD1LQ8N335 351 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 SMARCE1Q969G3 411 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 LMBRD1Q9NUN5 540 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 RBAKQ9NYW8 714 aaPredicted RBP12.67□□□□□ -0.38
CUX1-207ENST00000465461 ANK1P16157 1881 aa12.67□□□□□ -0.38
CUX1-207ENST00000465461 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
CUX1-207ENST00000465461 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 BIN1O00499 593 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 SOD2P04179 222 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 CTSAP10619 480 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 SMC1AQ14683 1233 aaKnown RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 TMEM132DQ14C87 1099 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 LLGL2Q6P1M3 1020 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 DCLRE1AQ6PJP8 1040 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 PRSS55Q6UWB4 352 aaPredicted RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 RNF168Q8IYW5 571 aaPredicted RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 MRPL43Q8N983 215 aaKnown RBP12.66□□□□□ -0.38
CUX1-207ENST00000465461 VN1R2Q8NFZ6 395 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 HERC2P3Q9BVR0 1158 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 TLE6Q9H808 572 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 PDE11AQ9HCR9 933 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 SLC38A7Q9NVC3 462 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 CLDND1Q9NY35 253 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
CUX1-207ENST00000465461 CLASP2O75122 1294 aaKnown RBP12.65□□□□□ -0.38
CUX1-207ENST00000465461 SMC2O95347 1197 aa12.65□□□□□ -0.38
CUX1-207ENST00000465461 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
CUX1-207ENST00000465461 RPL17P18621 184 aaKnown RBP12.65□□□□□ -0.38
CUX1-207ENST00000465461 PRCPP42785 496 aa12.65□□□□□ -0.38
CUX1-207ENST00000465461 PTPN14Q15678 1187 aa12.65□□□□□ -0.38
CUX1-207ENST00000465461 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
CUX1-207ENST00000465461 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms