RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 FLYWCH1Q4VC44 716 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 PABPC1LQ4VXU2 614 aaKnown RBP4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 DACT2Q5SW24 774 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 SYCP2LQ5T4T6 812 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 SEM1Q6ZVN7 128 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 DOK3Q7L591 496 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 APBB1IPQ7Z5R6 666 aaPredicted RBP4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 FRMD5Q7Z6J6 570 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 SH2D3CQ8N5H7 860 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 PLBD2Q8NHP8 589 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 FEZF2Q8TBJ5 459 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 LRTOMTQ8WZ04 291 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 ZNF512Q96ME7 567 aaPredicted RBP4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 KCNC2Q96PR1 638 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 MRI1Q9BV20 369 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 KCNH6Q9H252 994 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 ZCCHC4Q9H5U6 513 aa4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 AGO3Q9H9G7 860 aaKnown RBP4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 SIDT1Q9NXL6 827 aaKnown RBP4.61□□□□□ -1.67
HMGXB4-205ENST00000464480 NPEPPSL1A6NEC2 478 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PRR5-ARHGAP8B1AHC4 643 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 APAF1O14727 1248 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 KIAA0391O15091 583 aaKnown RBP4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 GRM6O15303 877 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PMM2O15305 246 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 FRS3O43559 492 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PEX14O75381 377 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 STC2O76061 302 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 IPO13O94829 963 aaKnown RBP4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PLATP00750 562 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 INHBBP09529 407 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 IFIT2P09913 472 aaKnown RBP4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 ALAS1P13196 640 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PRDX5P30044 214 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PIK3CGP48736 1102 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 CLRN1P58418 232 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 OS9Q13438 667 aaPredicted RBP4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM214AQ32MH5 1076 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 SPOCD1Q6ZMY3 1216 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM83AQ86UY5 434 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 SAMD3Q8N6K7 520 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 DCBLD1Q8N8Z6 715 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 NLGN4YQ8NFZ3 816 aaPredicted RBP4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 ZFP28Q8NHY6 868 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 TMEM176AQ96HP8 235 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 MPHOSPH9Q99550 1183 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 PACSIN1Q9BY11 444 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 LRRC27Q9C0I9 530 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 BHMT2Q9H2M3 363 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 STAP2Q9UGK3 403 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 CLCA2Q9UQC9 943 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 SLC30A1Q9Y6M5 507 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 DUSP10Q9Y6W6 482 aa4.6□□□□□ -1.67
HMGXB4-205ENST00000464480 NT5C1B-RDH14C9J2C7 533 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 F2RL2O00254 374 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PQBP1O60828 265 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 MFAP3LO75121 409 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 RAD17O75943 681 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 HAUS5O94927 633 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 AMHP03971 560 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 RAP2BP61225 183 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 UBXN11Q5T124 520 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 IL31Q6EBC2 164 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 SWSAP1Q6NVH7 229 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 ZNF529Q6P280 563 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 POLNQ7Z5Q5 900 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 CIR1Q86X95 450 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 FAM90A1Q86YD7 464 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 AOPEPQ8N6M6 819 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 SLC35B2Q8TB61 432 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 TFAP2CQ92754 450 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 NT5C1BQ96P26 610 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 GNRHR2Q96P88 292 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 MPHOSPH6Q99547 160 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 CPPED1Q9BRF8 314 aaPredicted RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 C22orf23Q9BZE7 217 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 NUP62CLQ9H1M0 184 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 ZMAT3Q9HA38 289 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PIH1D1Q9NWS0 290 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PLA2G3Q9NZ20 509 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PPP4R1LQ9P1A2 415 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 ZDHHC8Q9ULC8 765 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 TPCN1Q9ULQ1 816 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 ZFR2Q9UPR6 939 aaKnown RBP4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PCDHGB6Q9Y5F9 930 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 PCDHA1Q9Y5I3 950 aa4.59□□□□□ -1.67
HMGXB4-205ENST00000464480 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 TBKBP1A7MCY6 615 aa4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 POMCP01189 267 aa4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 RPL17P18621 184 aaKnown RBP4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 MGAT1P26572 445 aa4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 MSX2P35548 267 aaPredicted RBP4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 NEK3P51956 506 aa4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 HHEXQ03014 270 aa4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 IFIT5Q13325 482 aaKnown RBP4.58□□□□□ -1.68
HMGXB4-205ENST00000464480 BIRC2Q13490 618 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms