RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GPR62Q9BZJ7 368 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 GOLGA2P5Q9HBQ8 144 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 CNTN3Q9P232 1028 aa18.57■□□□□ 0.56
VPS52-215ENST00000464425 FAM189A1O60320 539 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 KIF4AO95239 1232 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 SOD2P04179 222 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 KCNE1P15382 129 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 IGFBP6P24592 240 aaPredicted RBP18.56■□□□□ 0.56
VPS52-215ENST00000464425 NDUFV1P49821 464 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 CLCNKBP51801 687 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 SOX4Q06945 474 aaPredicted RBP18.56■□□□□ 0.56
VPS52-215ENST00000464425 ALCAMQ13740 583 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 CLUL1Q15846 466 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 TJAP1Q5JTD0 557 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 LLGL2Q6P1M3 1020 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 FUT10Q6P4F1 479 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 VN1R2Q8NFZ6 395 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 POMGNT1Q8WZA1 660 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 C18orf25Q96B23 403 aaPredicted RBP18.56■□□□□ 0.56
VPS52-215ENST00000464425 FAM212AQ96EL1 285 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 RPF1Q9H9Y2 349 aaKnown RBP18.56■□□□□ 0.56
VPS52-215ENST00000464425 ADAM28Q9UKQ2 775 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 AGO2Q9UKV8 859 aaKnown RBP18.56■□□□□ 0.56
VPS52-215ENST00000464425 STYXL1Q9Y6J8 313 aa18.56■□□□□ 0.56
VPS52-215ENST00000464425 TRIP11Q15643 1979 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 LACTBL1A8MY62 500 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 CLASP2O75122 1294 aaKnown RBP18.55■□□□□ 0.56
VPS52-215ENST00000464425 TBX10O75333 385 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 EFEMP2O95967 443 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 ADSSP30520 456 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 ACOT2P49753 483 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 PTPN14Q15678 1187 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 ENOX2Q16206 610 aaKnown RBP18.55■□□□□ 0.56
VPS52-215ENST00000464425 KYAT1Q16773 422 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 LEXMQ3ZCV2 418 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 FAM26FQ5R3K3 315 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 KIAA1841Q6NSI8 718 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 STXBP4Q6ZWJ1 553 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 CDCA3Q99618 268 aaPredicted RBP18.55■□□□□ 0.56
VPS52-215ENST00000464425 HERC2P3Q9BVR0 1158 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 MRPL17Q9NRX2 175 aaKnown RBP18.55■□□□□ 0.56
VPS52-215ENST00000464425 SLC38A7Q9NVC3 462 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 STK39Q9UEW8 545 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 BARX2Q9UMQ3 279 aaPredicted RBP18.55■□□□□ 0.56
VPS52-215ENST00000464425 VCANP13611 3396 aa18.55■□□□□ 0.56
VPS52-215ENST00000464425 PVALEFA0A1B0GWK0 134 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 TULP1O00294 542 aaPredicted RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 KINO60870 393 aaKnown RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 B3GAT3O94766 335 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 GLP2RO95838 553 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 URODP06132 367 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 MCM4P33991 863 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 PPP2R3AQ06190 1150 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 POSTNQ15063 836 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 UPP1Q16831 310 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 DCLRE1AQ6PJP8 1040 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 RNF168Q8IYW5 571 aaPredicted RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 TMEM130Q8N3G9 435 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 TMEM206Q9H813 350 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 PLEKHA5Q9HAU0 1116 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 SLC39A2Q9NP94 309 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 CLEC1BQ9P126 229 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 HOOK1Q9UJC3 728 aaKnown RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 CPSF3Q9UKF6 684 aaKnown RBP18.54■□□□□ 0.56
VPS52-215ENST00000464425 IRAK3Q9Y616 596 aa18.54■□□□□ 0.56
VPS52-215ENST00000464425 LILRB3O75022 631 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 BMP1P13497 986 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 HOXD13P35453 343 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 GLUD2P49448 558 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 EHHADHQ08426 723 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 FAM171A1Q5VUB5 890 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 KIAA0319Q5VV43 1072 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 ZSWIM2Q8NEG5 633 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 KIF12Q96FN5 646 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 DDX27Q96GQ7 796 aaKnown RBP18.53■□□□□ 0.56
VPS52-215ENST00000464425 UROC1Q96N76 676 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 KLHL5Q96PQ7 755 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 TUBGCP4Q9UGJ1 667 aa18.53■□□□□ 0.56
VPS52-215ENST00000464425 SF3B1O75533 1304 aaKnown RBP eCLIP18.52■□□□□ 0.56
VPS52-215ENST00000464425 PODXLO00592 558 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 KLRC4O43908 158 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 CNPP09543 421 aaKnown RBP18.52■□□□□ 0.56
VPS52-215ENST00000464425 PRR29P0C7W0 189 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 DSG1Q02413 1049 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 USP41Q3LFD5 358 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 KMT5BQ4FZB7 885 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 PTCRAQ6ISU1 281 aaPredicted RBP18.52■□□□□ 0.56
VPS52-215ENST00000464425 CD300LGQ6UXG3 332 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 EPM2AIP1Q7L775 607 aaPredicted RBP18.52■□□□□ 0.56
VPS52-215ENST00000464425 CEP57Q86XR8 500 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 NELFCDQ8IXH7 590 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 ZNF507Q8TCN5 953 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 NOC3LQ8WTT2 800 aaKnown RBP18.52■□□□□ 0.56
VPS52-215ENST00000464425 RIN2Q8WYP3 895 aaPredicted RBP18.52■□□□□ 0.56
VPS52-215ENST00000464425 SAAL1Q96ER3 474 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 CBWD1Q9BRT8 395 aa18.52■□□□□ 0.56
VPS52-215ENST00000464425 FAM213AQ9BRX8 229 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms