RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CCDC169A6NNP5 214 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 E9PMD0 336 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 CCL16O15467 120 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 OR1D2P34982 312 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 NPTX2P47972 431 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 PEX3P56589 373 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 IL17AQ16552 155 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 XKR4Q5GH76 650 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 AXDND1Q5T1B0 1012 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-216ENST00000461187 ALKAL1Q6UXT8 129 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-216ENST00000461187 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
SMPD4-216ENST00000461187 CEP120Q8N960 986 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 C3orf58Q8NDZ4 430 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 SLC7A14Q8TBB6 771 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 FGF14Q92915 247 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 UROC1Q96N76 676 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 RAB34Q9BZG1 259 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 CDT1Q9H211 546 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 PTPRHQ9HD43 1115 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 ARHGAP28Q9P2N2 729 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 CDH7Q9ULB5 785 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 DNM3Q9UQ16 869 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 TICRRQ7Z2Z1 1910 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
SMPD4-216ENST00000461187 PP2D1A8MPX8 630 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 HIP1RO75146 1068 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 POU2F2P09086 479 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
SMPD4-216ENST00000461187 CDC25AP30304 524 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 GRM5P41594 1212 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-216ENST00000461187 MAPK7Q13164 816 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 UVSSAQ2YD98 709 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 PHLDB3Q6NSJ2 640 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 PARM1Q6UWI2 310 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 ITFG1Q8TB96 612 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 FGF13Q92913 245 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 NKD2Q969F2 451 aaPredicted RBP16.14■□□□□ 0.17
SMPD4-216ENST00000461187 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
SMPD4-216ENST00000461187 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
SMPD4-216ENST00000461187 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 ARHGEF3Q9NR81 526 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 POLIQ9UNA4 740 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 CDY1Q9Y6F8 540 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 OTOGLQ3ZCN5 2332 aa16.14■□□□□ 0.17
SMPD4-216ENST00000461187 SCN1AP35498 2009 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 FRYLO94915 3013 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 I3L4J1 428 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 LAD1O00515 517 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 ABLIM1O14639 778 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 XYLBO75191 536 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 RFX1P22670 979 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 PRPHP41219 470 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 BRCC3P46736 316 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 OSTNP61366 133 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 DMP1Q13316 513 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 ZNF568Q3ZCX4 644 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 RINT1Q6NUQ1 792 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 C1orf186Q6ZWK4 172 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 ZMAT2Q96NC0 199 aaKnown RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 CCDC94Q9BW85 323 aaPredicted RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 HCFC1R1Q9NWW0 138 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 DLGAP2Q9P1A6 1054 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 BACE2Q9Y5Z0 518 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 DENND4CQ5VZ89 1909 aa16.13■□□□□ 0.17
SMPD4-216ENST00000461187 ZNF638Q14966 1978 aaKnown RBP16.13■□□□□ 0.17
SMPD4-216ENST00000461187 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 DCNP07585 359 aaKnown RBP16.12■□□□□ 0.17
SMPD4-216ENST00000461187 PROZP22891 400 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 YARSP54577 528 aaKnown RBP16.12■□□□□ 0.17
SMPD4-216ENST00000461187 GPC5P78333 572 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 TOPORSQ9NS56 1045 aaPredicted RBP16.12■□□□□ 0.17
SMPD4-216ENST00000461187 DNMT3BQ9UBC3 853 aaKnown RBP16.12■□□□□ 0.17
SMPD4-216ENST00000461187 SIT1Q9Y3P8 196 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 RBM19Q9Y4C8 960 aaKnown RBP16.12■□□□□ 0.17
SMPD4-216ENST00000461187 DMXL1Q9Y485 3027 aa16.12■□□□□ 0.17
SMPD4-216ENST00000461187 SLC16A4O15374 487 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 MEFVO15553 781 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-216ENST00000461187 MCF2P10911 925 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 KCNE1P15382 129 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 STARD6P59095 220 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 DTHD1Q6ZMT9 781 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 MTSS1LQ765P7 747 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 SNX27Q96L92 541 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 ACAP3Q96P50 834 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 C17orf75Q9HAS0 396 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 SLC38A7Q9NVC3 462 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms