RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 FSBPO95073 299 aa17.36■□□□□ 0.37
LSS-205ENST00000457828 LAMC2Q13753 1193 aa17.36■□□□□ 0.37
LSS-205ENST00000457828 LBHD1Q9BQE6 289 aaPredicted RBP17.36■□□□□ 0.37
LSS-205ENST00000457828 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
LSS-205ENST00000457828 PABPC3Q9H361 631 aaKnown RBP17.36■□□□□ 0.37
LSS-205ENST00000457828 AIPL1Q9NZN9 384 aa17.36■□□□□ 0.37
LSS-205ENST00000457828 F8VZ95 297 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 AGTP01019 485 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 PSMC6P62333 389 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 MKL1Q969V6 931 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 INPP4AQ96PE3 977 aaPredicted RBP17.35■□□□□ 0.37
LSS-205ENST00000457828 TTC7AQ9ULT0 858 aaPredicted RBP17.35■□□□□ 0.37
LSS-205ENST00000457828 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 INHBEP58166 350 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 TMC3Q7Z5M5 1100 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 CTAGE3PQ8IX95 158 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 GPRASP2Q96D09 838 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 SPDL1Q96EA4 605 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 DGAT1O75907 488 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 CEP128Q6ZU80 1094 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 HAUS6Q7Z4H7 955 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 CCDC89Q8N998 374 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.35■□□□□ 0.37
LSS-205ENST00000457828 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
LSS-205ENST00000457828 APEX2Q9UBZ4 518 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 TRIM17Q9Y577 477 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 NKRFO15226 690 aaKnown RBP eCLIP17.35■□□□□ 0.375e-7■■□□□ 12
LSS-205ENST00000457828 ADORA2AP29274 412 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 CCDC117Q8IWD4 279 aaPredicted RBP17.35■□□□□ 0.37
LSS-205ENST00000457828 HAUS1Q96CS2 278 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 RAB20Q9NX57 234 aa17.35■□□□□ 0.37
LSS-205ENST00000457828 TMEM120BA0PK00 339 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 TLR2O60603 784 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 COMTP21964 271 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 TCF7P36402 384 aaPredicted RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 ARPP19P56211 112 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 ACTR2P61160 394 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 FKBP1BP68106 108 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 KRT17Q04695 432 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 DGKDQ16760 1214 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 ANKRD20A8PQ5CZ79 823 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 PPP1R21Q6ZMI0 780 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 SLC30A5Q8TAD4 765 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 FAM118BQ9BPY3 351 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 SEMA4AQ9H3S1 761 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 ERAP1Q9NZ08 941 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 TMEM88BA6NKF7 163 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 CYP26A1O43174 497 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 STRNO43815 780 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 PHF2O75151 1096 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 SPAG7O75391 227 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 TMEM253P0C7T8 217 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 CATSPERGQ6ZRH7 1159 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 RNF180Q86T96 592 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 LRRC71Q8N4P6 559 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 C9orf72Q96LT7 481 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 FAM213AQ9BRX8 229 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 CPSF2Q9P2I0 782 aaKnown RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 PALM2Q8IXS6 379 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 YIPF3Q9GZM5 350 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 CARD9Q9H257 536 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 A1CFQ9NQ94 594 aaKnown RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 TXLNGQ9NUQ3 528 aa17.34■□□□□ 0.37
LSS-205ENST00000457828 USP15Q9Y4E8 981 aaPredicted RBP17.34■□□□□ 0.37
LSS-205ENST00000457828 CFAP73A6NFT4 308 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 TRAPPC3O43617 180 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 BFSP1Q12934 665 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 MAPK7Q13164 816 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 KYNUQ16719 465 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 TATDN1Q6P1N9 297 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 XXYLT1Q8NBI6 393 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 CCHCR1Q8TD31 782 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 DDX23Q9BUQ8 820 aaKnown RBP17.33■□□□□ 0.37
LSS-205ENST00000457828 KATNAL1Q9BW62 490 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 SREBF1P36956 1147 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 VAMP7P51809 220 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 SPATA21Q7Z572 469 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 NSMCE1Q8WV22 266 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 C2orf40Q9H1Z8 148 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 SAYSD1Q9NPB0 183 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 PXMP2Q9NR77 195 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 PCDHB4Q9Y5E5 795 aa17.33■□□□□ 0.37
LSS-205ENST00000457828 CCDC160A6NGH7 325 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 PLCB4Q15147 1175 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 FUKQ8N0W3 1084 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 TPX2Q9ULW0 747 aaKnown RBP17.33■□□□□ 0.36
LSS-205ENST00000457828 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.33■□□□□ 0.36
LSS-205ENST00000457828 PDHA1P08559 390 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 CYP2C9P11712 490 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 CASP5P51878 434 aa17.33■□□□□ 0.36
LSS-205ENST00000457828 IFI35P80217 286 aaPredicted RBP17.33■□□□□ 0.36
LSS-205ENST00000457828 HGSNATQ68CP4 663 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms