RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
VPS16-205ENST00000453689 RNF168Q8IYW5 571 aaPredicted RBP15.98■□□□□ 0.15
VPS16-205ENST00000453689 EFHBQ8N7U6 833 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 MRPL43Q8N983 215 aaKnown RBP15.98■□□□□ 0.15
VPS16-205ENST00000453689 SPATA20Q8TB22 786 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 IKZF4Q9H2S9 585 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 RMND1Q9NWS8 449 aa15.98■□□□□ 0.15
VPS16-205ENST00000453689 SCN1AP35498 2009 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 A0A0B4J269 797 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 H3BQ06 376 aaPredicted RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 OGTO15294 1046 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 FAM189A1O60320 539 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 RHOBTB3O94955 611 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 GLP2RO95838 553 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 SOD2P04179 222 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 CXCL8P10145 99 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 CA8P35219 290 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 TNFSF9P41273 254 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 DLX2Q07687 328 aaPredicted RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 ALCAMQ13740 583 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 HSP90AA2PQ14568 343 aaPredicted RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 BMS1Q14692 1282 aaKnown RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 SLC10A6Q3KNW5 377 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 TJAP1Q5JTD0 557 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 ZBTB41Q5SVQ8 909 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 HPS3Q969F9 1004 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 ZMAT2Q96NC0 199 aaKnown RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 GSDMAQ96QA5 445 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 CDCA3Q99618 268 aaPredicted RBP15.97■□□□□ 0.15
VPS16-205ENST00000453689 HERC2P3Q9BVR0 1158 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 STK39Q9UEW8 545 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 ADAM28Q9UKQ2 775 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 PCDHA5Q9Y5H7 936 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 IRAK3Q9Y616 596 aa15.97■□□□□ 0.15
VPS16-205ENST00000453689 KIF4AO95239 1232 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 CLTAP09496 248 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 KCNE1P15382 129 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 NDUFV1P49821 464 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 RBM10P98175 930 aaKnown RBP15.96■□□□□ 0.15
VPS16-205ENST00000453689 SOX4Q06945 474 aaPredicted RBP15.96■□□□□ 0.15
VPS16-205ENST00000453689 PSMD2Q13200 908 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 KCNC3Q14003 757 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 PTPN14Q15678 1187 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 KYAT1Q16773 422 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 SKOR2Q2VWA4 1001 aaPredicted RBP15.96■□□□□ 0.15
VPS16-205ENST00000453689 LEXMQ3ZCV2 418 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 CCDC183Q5T5S1 534 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 FUT10Q6P4F1 479 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 STXBP4Q6ZWJ1 553 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 TAS1R1Q7RTX1 841 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 GLIS3Q8NEA6 775 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 VN1R2Q8NFZ6 395 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
VPS16-205ENST00000453689 HASPINQ8TF76 798 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 ERCC4Q92889 916 aaPredicted RBP15.96■□□□□ 0.15
VPS16-205ENST00000453689 ACCSQ96QU6 501 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 MSTO1Q9BUK6 570 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 GPR62Q9BZJ7 368 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 GOLGA2P5Q9HBQ8 144 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 KIAA1468Q9P260 1216 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 EXOC7Q9UPT5 735 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 STYXL1Q9Y6J8 313 aa15.96■□□□□ 0.15
VPS16-205ENST00000453689 TTC26A0AVF1 554 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 PRPF6O94906 941 aaKnown RBP15.95■□□□□ 0.14
VPS16-205ENST00000453689 BMP1P13497 986 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 ENOX2Q16206 610 aaKnown RBP15.95■□□□□ 0.14
VPS16-205ENST00000453689 SLFN12LQ6IEE8 588 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 SYAP1Q96A49 352 aaPredicted RBP15.95■□□□□ 0.14
VPS16-205ENST00000453689 PLEKHA5Q9HAU0 1116 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 TSC2P49815 1807 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 DENND4AQ7Z401 1863 aa15.95■□□□□ 0.14
VPS16-205ENST00000453689 EIF3DO15371 548 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS16-205ENST00000453689 LILRB3O75022 631 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CLASP2O75122 1294 aaKnown RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 TADA2AO75478 443 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 URODP06132 367 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 IGFBP6P24592 240 aaPredicted RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 GLUD2P49448 558 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CLCNKBP51801 687 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CLUL1Q15846 466 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 UPP1Q16831 310 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CAVIN1Q6NZI2 390 aaKnown RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 POMGNT1Q8WZA1 660 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 C18orf25Q96B23 403 aaPredicted RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 MSLNLQ96KJ4 702 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 UROC1Q96N76 676 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 GTPBP4Q9BZE4 634 aaKnown RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 RPF1Q9H9Y2 349 aaKnown RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 SLC39A2Q9NP94 309 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 MRPL17Q9NRX2 175 aaKnown RBP15.94■□□□□ 0.14
VPS16-205ENST00000453689 SLC38A7Q9NVC3 462 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CLEC1BQ9P126 229 aa15.94■□□□□ 0.14
VPS16-205ENST00000453689 CPSF3Q9UKF6 684 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms