RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 DAAM1Q9Y4D1 1078 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 ADGRG1Q9Y653 693 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 EPN1Q9Y6I3 576 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 MROH7Q68CQ1 1323 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 A0A0U1RQG5 324 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SSU72P8A0A1W2PR75 194 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 KBTBD13C9JR72 458 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 FOXN3O00409 490 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF263O14978 683 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 NRDCO43847 1150 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ZC3H11AO75152 810 aaKnown RBP eCLIP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 IL18RAPO95256 599 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 LCA5LO95447 670 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SERPING1P05155 500 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 CTSHP09668 335 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 PNMA6AP0CW24 399 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 RFX1P22670 979 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 THPOP40225 353 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 PRKCIP41743 596 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 AP3M2P53677 418 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 NCBP1Q09161 790 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 RAPGEF1Q13905 1077 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 DRAP1Q14919 205 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ZBTB6Q15916 424 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 DUOXA2Q1HG44 320 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 TMEM132AQ24JP5 1023 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 TSR1Q2NL82 804 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 FBXO47Q5MNV8 452 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF618Q5T7W0 954 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 NOTUMQ6P988 496 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 FBXO46Q6PJ61 603 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ALKAL1Q6UXT8 129 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 TRAPPC11Q7Z392 1133 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 CTU1Q7Z7A3 348 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 TMEM130Q8N3G9 435 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SMG8Q8ND04 991 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 FAM212AQ96EL1 285 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF333Q96JL9 665 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ACAP3Q96P50 834 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ADPGKQ9BRR6 497 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SYT11Q9BT88 431 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 PI4K2AQ9BTU6 479 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SEZ6LQ9BYH1 1024 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 RNF208Q9H0X6 261 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 NHEJ1Q9H9Q4 299 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 APOBEC3GQ9HC16 384 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ERVK-5Q9HDB9 667 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 UBE2TQ9NPD8 197 aaPredicted RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 STARD7Q9NQZ5 370 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SNTG2Q9NY99 539 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 ST3GAL5Q9UNP4 418 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 PPP2R2CQ9Y2T4 447 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 REXO2Q9Y3B8 237 aaKnown RBP6.48□□□□□ -1.37
SDC4P-201ENST00000453285 SQORQ9Y6N5 450 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 BRCA2P51587 3418 aa6.48□□□□□ -1.37
SDC4P-201ENST00000453285 A0A0U1RQJ8 604 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 EIF3CLB5ME19 914 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 F8VZ95 297 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 M0QZ92 97 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CAND2O75155 1236 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 RPS6KA5O75582 802 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NDUFA10O95299 355 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SGPL1O95470 568 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ASS1P00966 412 aaKnown RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 MYCP01106 439 aaPredicted RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CD4P01730 458 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NFICP08651 508 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CKBP12277 381 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 FERP16591 822 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SOX5P35711 763 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 STAT1P42224 750 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 LBX1P52954 281 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 MYL6P60660 151 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NCOA4Q13772 614 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 DSC3Q14574 896 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 LPIN1Q14693 890 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 GPNMBQ14956 572 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ASIC2Q16515 512 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ARHGAP44Q17R89 818 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 JADE1Q6IE81 842 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SPOPLQ6IQ16 392 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF571Q7Z3V5 609 aaPredicted RBP6.47□□□□□ -1.37
SDC4P-201ENST00000453285 NT5DC4Q86YG4 428 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CD302Q8IX05 232 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 FAM126BQ8IXS8 530 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 FAM71AQ8IYT1 594 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 CCDC170Q8IYT3 715 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 UBR7Q8N806 425 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 C1orf127Q8N9H9 656 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ACRBPQ8NEB7 543 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ATRIPQ8WXE1 791 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SHC3Q92529 594 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 PPP1R13BQ96KQ4 1090 aa6.47□□□□□ -1.37
SDC4P-201ENST00000453285 SNX27Q96L92 541 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms