RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 BRCC3P46736 316 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 EFNA5P52803 228 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 ORC2Q13416 577 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 ZNF568Q3ZCX4 644 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 MTSS1LQ765P7 747 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 SNX29Q8TEQ0 813 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 KIFAP3Q92845 792 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
GARNL3-210ENST00000453030 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 KIAA1024Q9UPX6 916 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 PHLPP2Q6ZVD8 1323 aa12.84□□□□□ -0.35
GARNL3-210ENST00000453030 F5P12259 2224 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 CCDC169A6NNP5 214 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 TMEM189-UBE2V1I3L0A0 370 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 HARSP12081 509 aaKnown RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 GLULP15104 373 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 ID4P47928 161 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 RBM25P49756 843 aaKnown RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 PEX3P56589 373 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 OSTNP61366 133 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 SOX4Q06945 474 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 RAB33AQ14088 237 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 UPP1Q16831 310 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 APBB1IPQ7Z5R6 666 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 HINFPQ9BQA5 517 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 CDT1Q9H211 546 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
GARNL3-210ENST00000453030 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
GARNL3-210ENST00000453030 COL4A2P08572 1712 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 PP2D1A8MPX8 630 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 K7ERI5 159 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 SEC24BO95487 1268 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 SP9P0CG40 484 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 MUTP22033 750 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 YARSP54577 528 aaKnown RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 STARD6P59095 220 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 UBXN2BQ14CS0 331 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 ZC3H14Q6PJT7 736 aaKnown RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 C1orf210Q8IVY1 113 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 FBXO18Q8NFZ0 1043 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 SHDQ96IW2 340 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 UROC1Q96N76 676 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 CCDC94Q9BW85 323 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 TNFSF13BQ9Y275 285 aa12.82□□□□□ -0.36
GARNL3-210ENST00000453030 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
GARNL3-210ENST00000453030 SMIM28A0A1B0GU29 152 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 E9PMD0 336 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 PODXLO00592 558 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 HIP1RO75146 1068 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 RHOP08100 348 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 POU2F2P09086 479 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 CEBPBP17676 345 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 CD72P21854 359 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 GRM5P41594 1212 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 NPTX2P47972 431 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 ARPP19P56211 112 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 ROR1Q01973 937 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 ACO2Q99798 780 aaKnown RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 LLPHQ9BRT6 129 aaKnown RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 RUSC1Q9BVN2 902 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 TARS2Q9BW92 718 aaKnown RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 MRPL4Q9BYD3 311 aaKnown RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-210ENST00000453030 PPP4R2Q9NY27 417 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 BACE2Q9Y5Z0 518 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 TCHHQ07283 1943 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 TSC2P49815 1807 aa12.81□□□□□ -0.36
GARNL3-210ENST00000453030 WDR27A2RRH5 827 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 PRRG1O14668 218 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 LRG1P02750 347 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 CDC25AP30304 524 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
GARNL3-210ENST00000453030 FOXK2Q01167 660 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 PFKPQ01813 784 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 PTGDRQ13258 359 aa12.8□□□□□ -0.36
GARNL3-210ENST00000453030 ZRSR1Q15695 479 aaKnown RBP12.8□□□□□ -0.36
GARNL3-210ENST00000453030 UVSSAQ2YD98 709 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms