RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 USP7Q93009 1102 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 IFT22Q9H7X7 185 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 MMRN2Q9H8L6 949 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 USP35Q9P2H5 1018 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 TRPS1Q9UHF7 1281 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 NRAPQ86VF7 1730 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 THSD7AQ9UPZ6 1657 aa5.81□□□□□ -1.48
GTF3C3-207ENST00000451088 RGPD8O14715 1765 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 RPGRIP1LQ68CZ1 1315 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 E9PCH4 1651 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 GOLGA6L6A8MZA4 724 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 NEMP1O14524 444 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 CLEC2LP0C7M8 214 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 MAKP20794 623 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 HSD3B2P26439 372 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 ID4P47928 161 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 MGAT5Q09328 741 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 PDCD1Q15116 288 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 FAM214AQ32MH5 1076 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 PITRM1Q5JRX3 1037 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 GIMAP6Q6P9H5 292 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 LMBR1LQ6UX01 489 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 DDX46Q7L014 1031 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 PTF1AQ7RTS3 328 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 MB21D1Q8N884 522 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 STK32BQ9NY57 414 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 NOC2LQ9Y3T9 749 aaKnown RBP5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 HFM1A2PYH4 1435 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 ATP10DQ9P241 1426 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 MAP3K5Q99683 1374 aa5.8□□□□□ -1.48
GTF3C3-207ENST00000451088 ULK1O75385 1050 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 LTA4HP09960 611 aaKnown RBP5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 CASRP41180 1078 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 SESN3P58005 492 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 MEF2AQ02078 507 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 RABL3Q5HYI8 236 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 CCDC62Q6P9F0 684 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 CLRN3Q8NCR9 226 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 OR5M3Q8NGP4 307 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 IL17RAQ96F46 866 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 TTC1Q99614 292 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 TRIM8Q9BZR9 551 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 SLC2A4RGQ9NR83 387 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 TOPORSQ9NS56 1045 aaPredicted RBP5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 GPRC5BQ9NZH0 403 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 CDY2AQ9Y6F7 541 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 CCDC144AA2RUR9 1427 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 NAIPQ13075 1403 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 SBNO1A3KN83 1393 aa5.79□□□□□ -1.48
GTF3C3-207ENST00000451088 SBF2Q86WG5 1849 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 SUV39H1O43463 412 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 TMEM127O75204 238 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 EVA1CP58658 441 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 TGFB2P61812 414 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 DUSP2Q05923 314 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 DPTQ07507 201 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 UBE3CQ15386 1083 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 FSCN1Q16658 493 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 C19orf54Q5BKX5 351 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 TNS3Q68CZ2 1445 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 DOK3Q7L591 496 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 STRA8Q7Z7C7 330 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 OR52N2Q8NGI0 321 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 NEU4Q8WWR8 484 aaPredicted RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 LARP4BQ92615 738 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 KCTD10Q9H3F6 313 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 SLITRK6Q9H5Y7 841 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 CAAP1Q9H8G2 361 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 PRDM11Q9NQV5 511 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 APOBEC2Q9Y235 224 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 TMA7Q9Y2S6 64 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 ARHGEF10O15013 1369 aa5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 COL14A1Q05707 1796 aaKnown RBP5.78□□□□□ -1.48
GTF3C3-207ENST00000451088 DNAJC6O75061 913 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 LPLP06858 475 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 ADH4P08319 380 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 GYPEP15421 78 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 GZMKP49863 264 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 PURAQ00577 322 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 STRN3Q13033 797 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 TXNRD1Q16881 649 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 CT83Q5H943 113 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 SDE2Q6IQ49 451 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 GPRIN1Q7Z2K8 1008 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 FAM83AQ86UY5 434 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 ULK2Q8IYT8 1036 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 PGBD4Q96DM1 585 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 CLIP3Q96DZ5 547 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 ACAP3Q96P50 834 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 CPPED1Q9BRF8 314 aaPredicted RBP5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 LSM14BQ9BX40 385 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 CPEB1Q9BZB8 566 aaKnown RBP5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 ABCA3Q99758 1704 aa5.77□□□□□ -1.49
GTF3C3-207ENST00000451088 NEXMIFQ5QGS0 1516 aa5.76□□□□□ -1.49
GTF3C3-207ENST00000451088 HK1P19367 917 aa5.76□□□□□ -1.49
GTF3C3-207ENST00000451088 SOX5P35711 763 aa5.76□□□□□ -1.49
GTF3C3-207ENST00000451088 MASP1P48740 699 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms