RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ERMNQ8TAM6 284 aa26.85■■□□□ 1.89
PMS1-214ENST00000446877 SECISBP2LQ93073 1101 aaKnown RBP26.85■■□□□ 1.89
PMS1-214ENST00000446877 GDE1Q9NZC3 331 aa26.85■■□□□ 1.89
PMS1-214ENST00000446877 MRPS17Q9Y2R5 130 aaKnown RBP26.85■■□□□ 1.89
PMS1-214ENST00000446877 BACE2Q9Y5Z0 518 aa26.85■■□□□ 1.89
PMS1-214ENST00000446877 GPR179Q6PRD1 2367 aa26.85■■□□□ 1.89
PMS1-214ENST00000446877 CACNA1IQ9P0X4 2223 aa26.85■■□□□ 1.89
PMS1-214ENST00000446877 CEP250Q9BV73 2442 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 TMEM189-UBE2V1I3L0A0 370 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 ECI2O75521 394 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 CYP11B2P19099 503 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 ZNF852Q6ZMS4 543 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 TPRG1Q6ZUI0 275 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 GPR161Q8N6U8 529 aaKnown RBP26.84■■□□□ 1.89
PMS1-214ENST00000446877 BSNDQ8WZ55 320 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 MCRS1Q96EZ8 462 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 UROC1Q96N76 676 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 POLR3CQ9BUI4 534 aaPredicted RBP26.84■■□□□ 1.89
PMS1-214ENST00000446877 TMEM60Q9H2L4 133 aa26.84■■□□□ 1.89
PMS1-214ENST00000446877 WNT7AO00755 349 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 MED24O75448 989 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 ELF1P32519 619 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 MCM7P33993 719 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 CLCNKBP51801 687 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 EFNA5P52803 228 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 FOSBP53539 338 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 RSPO4Q2I0M5 234 aaPredicted RBP26.83■■□□□ 1.89
PMS1-214ENST00000446877 GLRA4Q5JXX5 417 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 EEF1DP3Q658K8 133 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 IFT74Q96LB3 600 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 CCDC113Q9H0I3 377 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 ZSCAN32Q9NX65 697 aa26.83■■□□□ 1.89
PMS1-214ENST00000446877 RHOP08100 348 aa26.82■■□□□ 1.88
PMS1-214ENST00000446877 PTPN2P17706 415 aa26.82■■□□□ 1.88
PMS1-214ENST00000446877 SDHBP21912 280 aa26.82■■□□□ 1.88
PMS1-214ENST00000446877 CLDN23Q96B33 292 aa26.82■■□□□ 1.88
PMS1-214ENST00000446877 PPP1R10Q96QC0 940 aaKnown RBP26.82■■□□□ 1.88
PMS1-214ENST00000446877 NCOR2Q9Y618 2525 aa26.82■■□□□ 1.88
PMS1-214ENST00000446877 LRG1P02750 347 aa26.81■■□□□ 1.88
PMS1-214ENST00000446877 TKTP29401 623 aaKnown RBP26.81■■□□□ 1.88
PMS1-214ENST00000446877 ATF7IP2Q5U623 682 aa26.81■■□□□ 1.88
PMS1-214ENST00000446877 GTF3C6Q969F1 213 aa26.81■■□□□ 1.88
PMS1-214ENST00000446877 PRRG1O14668 218 aa26.8■■□□□ 1.88
PMS1-214ENST00000446877 TARSP26639 723 aaKnown RBP26.8■■□□□ 1.88
PMS1-214ENST00000446877 RPA1P27694 616 aa26.8■■□□□ 1.88
PMS1-214ENST00000446877 SAFBQ15424 915 aaKnown RBP eCLIP26.8■■□□□ 1.88
PMS1-214ENST00000446877 UPP1Q16831 310 aa26.8■■□□□ 1.88
PMS1-214ENST00000446877 DDX27Q96GQ7 796 aaKnown RBP26.8■■□□□ 1.88
PMS1-214ENST00000446877 AVENQ9NQS1 362 aaPredicted RBP26.8■■□□□ 1.88
PMS1-214ENST00000446877 I3L4J1 428 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 IGFBP6P24592 240 aaPredicted RBP26.79■■□□□ 1.88
PMS1-214ENST00000446877 RPS9P46781 194 aaKnown RBP26.79■■□□□ 1.88
PMS1-214ENST00000446877 YARSP54577 528 aaKnown RBP26.79■■□□□ 1.88
PMS1-214ENST00000446877 ANAPC15P60006 121 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 ME3Q16798 604 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 ZBTB44Q8NCP5 570 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 NSUN7Q8NE18 718 aaKnown RBP26.79■■□□□ 1.88
PMS1-214ENST00000446877 ZNF461Q8TAF7 563 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 ELSPBP1Q96BH3 223 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 KIFC3Q9BVG8 833 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 PLA2G2FQ9BZM2 168 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 HEBP1Q9NRV9 189 aa26.79■■□□□ 1.88
PMS1-214ENST00000446877 DOCK6Q96HP0 2047 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 EDN1P05305 212 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 ADCY1Q08828 1119 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 SLC5A9Q2M3M2 681 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 NT5DC1Q5TFE4 455 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 TANGO2Q6ICL3 276 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 KIFAP3Q92845 792 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 GOLGA2P5Q9HBQ8 144 aa26.78■■□□□ 1.88
PMS1-214ENST00000446877 TOPORSQ9NS56 1045 aaPredicted RBP26.78■■□□□ 1.88
PMS1-214ENST00000446877 SMG5Q9UPR3 1016 aaKnown RBP26.78■■□□□ 1.88
PMS1-214ENST00000446877 SMIM28A0A1B0GU29 152 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 ARHGEF37A1IGU5 675 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 K7ERI5 159 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 MAN2B1O00754 1011 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 ZNF197O14709 1029 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 JAK2O60674 1132 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 CEBPBP17676 345 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 BRCC3P46736 316 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 ARPP19P56211 112 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 ROR1Q01973 937 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 SLC8B1Q6J4K2 584 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 TSSK4Q6SA08 328 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 CD300LGQ6UXG3 332 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 DNASE1L2Q92874 299 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 CORO1BQ9BR76 489 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 CCDC94Q9BW85 323 aaPredicted RBP26.77■■□□□ 1.88
PMS1-214ENST00000446877 FAM126AQ9BYI3 521 aaPredicted RBP26.77■■□□□ 1.88
PMS1-214ENST00000446877 EPC1Q9H2F5 836 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 BRD9Q9H8M2 597 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 SLC38A7Q9NVC3 462 aa26.77■■□□□ 1.88
PMS1-214ENST00000446877 TBC1D4O60343 1298 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 OR52Z1P0C646 297 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 HAUS3Q68CZ6 603 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 CYP4F11Q9HBI6 524 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 ZFP14Q9HCL3 533 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 POLD4Q9HCU8 107 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 TNFSF13BQ9Y275 285 aa26.76■■□□□ 1.87
PMS1-214ENST00000446877 MYH15Q9Y2K3 1946 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms