RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 RFC2P35250 354 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PPP1R2P41236 205 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 TPM4P67936 248 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 MYL7Q01449 175 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RNASELQ05823 741 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM132DQ14C87 1099 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PSMD6Q15008 389 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 TDRD10Q5VZ19 366 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CHRDL2Q6WN34 429 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZC3H3Q8IXZ2 948 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RPUSD2Q8IZ73 545 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SEMA4DQ92854 862 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RNPC3Q96LT9 517 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CEP63Q96MT8 703 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 GTPBP4Q9BZE4 634 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 XPO4Q9C0E2 1151 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CERS4Q9HA82 394 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CHST12Q9NRB3 414 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 INTS13Q9NVM9 706 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 POLIQ9UNA4 740 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PRG3Q9Y2Y8 225 aaPredicted RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SMIM28A0A1B0GU29 152 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC16A3O15427 465 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZC3H11AO75152 810 aaKnown RBP eCLIP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 DDHD2O94830 711 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARHGEF15O94989 841 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 FGFR1OPO95684 399 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 CST3P01034 146 aaPredicted RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM191BP0C7N4 346 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 PNMA6AP0CW24 399 aaPredicted RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC9A1P19634 815 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 POLR2BP30876 1174 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 ABCD1P33897 745 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 PBX2P40425 430 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 PIK3CAP42336 1068 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 RAP1GAPP47736 663 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 OR1G1P47890 313 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 UBXN1Q04323 297 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 ORC1Q13415 861 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 GSE1Q14687 1217 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 VWA3BQ502W6 1294 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 NOMO2Q5JPE7 1267 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 MIIPQ5JXC2 388 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 GLB1LQ6UWU2 654 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 TRIM59Q8IWR1 403 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 C12orf56Q8IXR9 622 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 SPC24Q8NBT2 197 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 TAS1R2Q8TE23 839 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 PARD3BQ8TEW8 1205 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 APBB2Q92870 758 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 CCDC51Q96ER9 411 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 B3GALT6Q96L58 329 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 MFSD14AQ96MC6 490 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 CASD1Q96PB1 797 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 YME1L1Q96TA2 773 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 CGRRF1Q99675 332 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 LSM14BQ9BX40 385 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 FTHL17Q9BXU8 183 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM117Q9H0C3 514 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 AJAP1Q9UKB5 411 aaPredicted RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 AGAP1Q9UPQ3 857 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC4A7Q9Y6M7 1214 aa8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
SF3A3P1-201ENST00000446317 TET1Q8NFU7 2136 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TTC26A0AVF1 554 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 HCRTO43612 131 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 VNN1O95497 513 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 LDHAP00338 332 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 TNNC2P02585 160 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 AFPP02771 609 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 ITGB1P05556 798 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 ATP2A2P16615 1042 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 CLCNKBP51801 687 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 UBASH3AP57075 661 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 MYL6P60660 151 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 NFIL3Q16649 462 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 MAN2A1Q16706 1144 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 APTXQ7Z2E3 356 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 APBB1IPQ7Z5R6 666 aaPredicted RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 FRMD5Q7Z6J6 570 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 MRPL10Q7Z7H8 261 aaKnown RBP8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 NPAS4Q8IUM7 802 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARHGEF19Q8IW93 802 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 FAM114A1Q8IWE2 563 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 HACE1Q8IYU2 909 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 GSTCDQ8NEC7 633 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 URGCPQ8TCY9 931 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 CPLX3Q8WVH0 158 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 KAT5Q92993 513 aa8.17□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC35C1Q96A29 364 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms